Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0439 ATGACTCGCATATTGGTTCAGAGGGGTTCCACTGGTAGTTCCTCTTCGAATCCAAATCCAAACCGTTCTGGTGGGTCCTCGTCTGCGCGGGGTGAGCCACAGGTTTCAGTTTCCCAGCCTGTGAGGGATGAGGTAAGGGAAGATGAAGTGATGGAAGTAGTTGTTAGTGAGGAGGTTGAGAATAATGGTGATTTTAGTAAGGCAAAAAGTGACGATCTTTCGACAGGGAACCTTCATTTTGAGCAGAATGATGGTTCATGTGATGATGAAGTTGTTGTTGTTGAGAAAGATGTTAAGGATGTGGATGTAGTGAAAGAATCGACTGGACTAAGGATTGCCTCAGAAAACGAGGGCAAAAGTGGGGGTTCTTCTTCTCTTGCTGCGGGCAGTGGTAGTTCTTGTCCACCACCACCTCCTGTTCCACCTCCAAAGCCTTCAGCAGCTAATATAAATTCAAGGAGGAATCTGATGGGGCCTTCGAATTCTGGCAGCATTGGATCATCTCGGAGAGCATCTGTGTGGCCTGTTGTTTCGGCTAGGACTTCACCTGCTGTATCTCGACCTTCTTCTCCCAGGTCTCATAATGAAAGTGATGGGTACAATAGTGCTGATGAACAGAAGCCACACTATGTATCAACTTACGATGATTTAGTGGAAAGAGAGCGGCATTTTGTAATTGATATCAGAAGGGCTAAAGGTTATGAAGTTAAAAAAATGATGGAGGATGGAAATTGTCTTTTTCGTGCTATCGCCGATCAGGTGTATGGGGATTCTGAATTGTATGATTTGGTCAGACAGATGTGCATAGATTATATGGAGCGGGAGAGAGACCACTTTTCTCAGTTTATAACTGAAGGCTTCACATCATACTGTAAGAGGAAGAGAAGGGATAAGGTCTATGGGAACAATGTTGAGATCCAAGCCATGTGTGAAATGTATAATCGCCCCATTCATATATACTTCTACACTACAGAACCTATCAATATCTTTCAAGGAAGCTATAACACTGACACACCACCAATCCGATTGAGTTACCATCATGGGAATCATTACAACTCCCTTGTTGACCCACGACGCACAACAATTGGTGCTGGACTTGGGTTCAGTAGTCTTCGCGGGACAAATGTTGACAAAGATCAAGTCAAGGATGCTATTAAATCTCAACAAGACCAACAGATCAATAATGCACTTTTAGCTGAGGGACGATTTTACTCTGACCTTGAGCTCACGGAGAAGGAAATTGAACGCATGGTGATGGCAGTTTCTAGAGCTGAGTATCTTGCAGATGGTACATTTAAGCAACAGCTTAGCCATAGAGAATCATCCACCTCAAATGCCGAACCATCATCTTCTGGAGCAAGTGATGCAGCAGGATCATCCGGCACTGATCCGAAGATGGAAGCTGGGAAAGAGCATGGTTGTGATCTTAGTAGCAGTATGCAGATAGTACTATCAATGGGATTCAGTTACCTCCAAGCTATTGAGGCTTACAGTATATTTGGGGATGATGTTGATTCTATGGTTTGTTACTTGTTGGAAACTGGCAATAGCAGCAGGCGTAAAGGCAAGGCCACTGAATGA 1581 0.4409 MTRILVQRGSTGSSSSNPNPNRSGGSSSARGEPQVSVSQPVRDEVREDEVMEVVVSEEVENNGDFSKAKSDDLSTGNLHFEQNDGSCDDEVVVVEKDVKDVDVVKESTGLRIASENEGKSGGSSSLAAGSGSSCPPPPPVPPPKPSAANINSRRNLMGPSNSGSIGSSRRASVWPVVSARTSPAVSRPSSPRSHNESDGYNSADEQKPHYVSTYDDLVERERHFVIDIRRAKGYEVKKMMEDGNCLFRAIADQVYGDSELYDLVRQMCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVEIQAMCEMYNRPIHIYFYTTEPINIFQGSYNTDTPPIRLSYHHGNHYNSLVDPRRTTIGAGLGFSSLRGTNVDKDQVKDAIKSQQDQQINNALLAEGRFYSDLELTEKEIERMVMAVSRAEYLADGTFKQQLSHRESSTSNAEPSSSGASDAAGSSGTDPKMEAGKEHGCDLSSSMQIVLSMGFSYLQAIEAYSIFGDDVDSMVCYLLETGNSSRRKGKATE* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0439 526 MobiDBLite consensus disorder prediction 1 35 - -
Lan13g0439 526 MobiDBLite consensus disorder prediction 434 472 - -
Lan13g0439 526 ProSiteProfiles OTU domain profile. 234 357 IPR003323 -
Lan13g0439 526 MobiDBLite consensus disorder prediction 434 458 - -
Lan13g0439 526 MobiDBLite consensus disorder prediction 132 146 - -
Lan13g0439 526 PANTHER OTU DOMAIN-CONTAINING PROTEIN 5-LIKE ISOFORM X1 33 479 - -
Lan13g0439 526 MobiDBLite consensus disorder prediction 104 209 - -
Lan13g0439 526 MobiDBLite consensus disorder prediction 68 82 - -
Lan13g0439 526 SUPERFAMILY Cysteine proteinases 223 357 IPR038765 -
Lan13g0439 526 MobiDBLite consensus disorder prediction 1 88 - -
Lan13g0439 526 MobiDBLite consensus disorder prediction 148 175 - -
Lan13g0439 526 MobiDBLite consensus disorder prediction 113 131 - -
Lan13g0439 526 Gene3D - 214 367 - -
Lan13g0439 526 Pfam OTU-like cysteine protease 242 351 IPR003323 -
Lan13g0439 526 MobiDBLite consensus disorder prediction 182 197 - -
Lan13g0439 526 PANTHER OTU DOMAIN CONTAINING PROTEIN 33 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0439 Lan-Chr13 3180238 3187013 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0439 K12655 - gmx:100780250 696.041