Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0433 ATGGCAACCATGTCAGCTGTGAATGTTTCTCCTAGTTGCATGTTTCAACCTGCAATTCAAAACCGATCCACTGTGGCGACCATTGTGAAGTGCCCTTTCTCCATTGGGTCTGTGAAGAGTGTTTCCAGATCTTTTCGCTTGAAGTCCTCCTCTTCATTTAGAGTGACTGCCATGGCTTCTTACAAGGTTAAGCTGGTCGGCCCAGATGGACAAGAGAATGAATTTGAGGCCCCGGATGATACTTACATCTTGGATGCAGCAGAGAACGCTGGAGTCGAACTTCCTTATTCGTGCCGTGCTGGAGCATGCTCTACCTGTGCTGGAAAGATTATTTCAGGTCAGGTGGATCAGTCTGATGGCTCATTCCTTGATGACAATCAACTGAAGGATGGCTATCTGCTTACCTGTGTCTCTTATCCGACTTCAGACCTTGTAATTCAAACTCACCAGGAGGAATCACTCTACTGA 468 0.4679 MATMSAVNVSPSCMFQPAIQNRSTVATIVKCPFSIGSVKSVSRSFRLKSSSSFRVTAMASYKVKLVGPDGQENEFEAPDDTYILDAAENAGVELPYSCRAGACSTCAGKIISGQVDQSDGSFLDDNQLKDGYLLTCVSYPTSDLVIQTHQEESLY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0433 155 Pfam 2Fe-2S iron-sulfur cluster binding domain 68 141 IPR001041 GO:0051536
Lan13g0433 155 PANTHER FERREDOXIN 4 155 - -
Lan13g0433 155 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 59 155 IPR010241 GO:0009055|GO:0022900|GO:0051537
Lan13g0433 155 PANTHER FERREDOXIN 4 155 - -
Lan13g0433 155 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 61 152 IPR001041 GO:0051536
Lan13g0433 155 CDD fer2 63 147 IPR001041 GO:0051536
Lan13g0433 155 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 98 106 IPR006058 GO:0051537
Lan13g0433 155 Gene3D - 58 155 IPR012675 -
Lan13g0433 155 SUPERFAMILY 2Fe-2S ferredoxin-like 56 153 IPR036010 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0433 Lan-Chr13 3139779 3141440 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0433 K02639 - gmx:100785611 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0364 7 2496284 2498203 Lan13g0433 13 3139779 3141440 LSH
Lan8g1596 8 22940697 22942710 Lan13g0433 13 3139779 3141440 LSH