Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0428 ATGCCTGGGGTTTCAGAAAACAAAGATGGATCTGAAACAGAAACCCCAATCCCCAAATTTTTCACCACAATAATTTATTCCTTTCCTTATTTAGCATCACCCACCACCAATTCCATCCTTAAGAACACGTTCCCAATGAAACGCACCGTTCGCCCCTTATTCATGCTTCTCTTTCTCATTGTCTTTGCTGCCACTGTTACCTCCAGAGCCATGATTCGCCGAGGCTTGATCTCCATTGATCACGAAACCAGAGTCATGATCCAAGATCCACAACTGTTGTTAAATGCTACACTGCTGAAACACGCGGCAATTGATATTGGAGAAGAGAAAAGTAAGCAGGAAATCCAGAATCTTCTAGATGGAAACATCCGCAGCCAAGCGCGCCACCGGACCTTTGTCTCGTGGAGGCGATTTATTCACCATGATGTTGACAAATCATCAAGGAATGTGAACCTTCCAGCGACAATGCGTTCGCCACTGTTTTATCGATACTGGTTGGATTTTCGGAAGGTTCTGAATGAATGGGCTAGGAAGAAGAGGTTCCAACCTGGTATCATGTTGGAATTGATTAGATCGGTGAAGGTTCCGATAGATAGGTACAGTGGAGTTTTCGATTCCAGTGAACAGAGATATGCTTCATGTGCTGTTGTTGGGAACAGTGGAATTCTGCTGAACAAGGATTATGGGAGTTTGATTGATGCACATGATGTTGTTATAAGGTTGAACAATGCAAGGGTTGATAACTTTGAGCACAAGGTTGGGAAGAAAACTAGCATTTCATTTGTGAATAGCAACATTTTGCATCTTTGTGCAAGGAGGGAAGGGTGTTTTTGCCACCCTTATGGTGCTAATGTTCCAATTGTTATGTATATTTGTCAAGCAATGCATTTCCTGGATTACACTGTGTGTAACTCATCTCACAAGGCACCACTTTTGGTAACCGATCCTAGATTCGATGTGTTGTGTGCTAGAATTGTGAAGTACTACTCTTTGAAGAGGTTTGTGGAGGAATCAGGGAAAGGTTTGGAAGAATGGGGTTCTGCCCATGATGGTGCTTTGTTCCATTATTCTTCTGGAATGCAGGCTGTGATGTTGGGTTTGGGAATATGTGATAAAGTTAGCATCTTTGGGTTTGGGAAATCAGCTTCTGCTAAGCATCATTATCATACTAACCAAAAAGCTGAGCTTCATCTGCATGATTATGAGGCAGAATATGCTTTTTACCGCGACCTTGTTGATGGACGTAAGCCGATACCATTTCTCGTGGACGCATTCAAGGTTCCTCCTGTTGTTATGTATCATTGA 1305 0.4268 MPGVSENKDGSETETPIPKFFTTIIYSFPYLASPTTNSILKNTFPMKRTVRPLFMLLFLIVFAATVTSRAMIRRGLISIDHETRVMIQDPQLLLNATLLKHAAIDIGEEKSKQEIQNLLDGNIRSQARHRTFVSWRRFIHHDVDKSSRNVNLPATMRSPLFYRYWLDFRKVLNEWARKKRFQPGIMLELIRSVKVPIDRYSGVFDSSEQRYASCAVVGNSGILLNKDYGSLIDAHDVVIRLNNARVDNFEHKVGKKTSISFVNSNILHLCARREGCFCHPYGANVPIVMYICQAMHFLDYTVCNSSHKAPLLVTDPRFDVLCARIVKYYSLKRFVEESGKGLEEWGSAHDGALFHYSSGMQAVMLGLGICDKVSIFGFGKSASAKHHYHTNQKAELHLHDYEAEYAFYRDLVDGRKPIPFLVDAFKVPPVVMYH* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0428 434 PIRSF Sialyl_trans 45 303 IPR012163 GO:0006486|GO:0008373
Lan13g0428 434 PIRSF Sialyl_trans 323 418 IPR012163 GO:0006486|GO:0008373
Lan13g0428 434 Gene3D Glycosyl transferase family 29 107 417 IPR038578 -
Lan13g0428 434 Pfam Glycosyltransferase family 29 (sialyltransferase) 203 413 IPR001675 GO:0006486|GO:0008373
Lan13g0428 434 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 45 434 - -
Lan13g0428 434 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 45 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0428 Lan-Chr13 3082293 3084410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0428 179 378 Glycosyltransferase AT3G48820 23.529 4.90e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0428 K00786 - gmx:100789506 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0358 7 2456338 2458495 Lan13g0428 13 3082293 3084410 LSH