Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0422 ATGATTTTGCTGTTAAGACCTTCTTTATCTTCTTCTCCATGTGTTAGTGATCACAGAAACAAAACCTTCTTCCCTCTCCGTACCACTCGCCACGTCTCCATTCGATGCTCTTCAACCGTGCAAGAGATAGACAACTCCGAAAAGGAGCTCCGTTCTTCTTCGCTTACATTCCCGCCACTCAGGGCGGCGAAGAGGGTGGTTCTGGTGAGACACGGCCAGAGCACATGGAACGCTGAAGGCAGAATCCAAGGTAGTTCCGATTTCTCTGTTCTCACTAATAAAGGCCTATCTCAGGCTGAGATTTCCCGCCAAATGCTCATCAATGACCGTTTCGATGCTTGTTTTGCCAGTCCCTTGGCACGGTCGAAAAGAACGGCGGAAATCATATGGGGAGCCCGTGAAGAGCAAATAATTCCGGAGTACGATTTGAGGGAAATCGATTTGTACTCATTCCAAGGCCTTTTGAAGCATGAGGGACAAGAAAGGTTTGGCTCTGCTTTTCGTCAATGGCAAGTAGATGCTGTGAATTTCGTCATTGATGGTCATTATCCAGTGAGAGAGTTGTGGGAACGTGCTAGAAGCTGCTGGCCTAAAATATTAGCCCATGATAGCAGGTCTGTTCTTGTGGTTGCACACAATGCTGTTAATCAAGCTCTTATTGCTTCAGCGATTGGTTTGGGACCAGAGTATTTCAGAAGCTTACTTCAGAGCAATTGTGGTGTAAGTGTGCTTGATTTCATCCCAAGATCTGAGGGTGGGTCTCCACATATTTGCCTTAACCGCTTGAATCAGACCCCTGGTTCACCTATTGCTGATGAGAAGTCTGGAGGTAGAGAAACAAACAAGCGAATAATACTTGTTTGTCATGGATCTACTTTGAGCAATACAGAGGATGGTTTTTCTTTTGCTGGTGATCGACCACTGGACATGCTTGGTGTTATACAGTCCCAGAAATCTGCGGAGCTACTTCTTGACTTGAAAGTGAATTCCATTATTAGCAGTCCTAATAAAGCTTGTGTGGAGACAGCAATGGCCATCTCCAAGGTACAAGAAGCTGCAGATTGCTTGGGTGCTGACTGTGTGCCACGCCATGTTGAGTTGAAGCAGATCGGAAACCTTGATATTGAAACAATCTTTCAGCAATCCAAAATGGATATATCCAGTTTTCCAACTATTCAGTCTGGTTGGTTAAATAGAATTGAGGATGTATTGAAGACAACATTATGGGATCAATCTAAAAAAATCTGGCAATCCGTGTTGGATGAAATTTCTGATGAATCTAGCACAGATGTTGCAGTTGTAGTTGGTCATCCTGCAATCCACATAGCATTATTGGGACACTGCCTTAATTTGACGAAAGAATGGTTCGGATCATTTCATCTTGATGCTGGGAGCATTAGTGTCCTTGACTTCCCTGAGGGACCTAAAGGAGGAGGTGTTGTCAGGTGCATAAATTATACTGCACATTTGGGGAGATGGTCCATCCCTATTACAAGATCGGCAGAGGATGGTGAATAG 1518 0.4453 MILLLRPSLSSSPCVSDHRNKTFFPLRTTRHVSIRCSSTVQEIDNSEKELRSSSLTFPPLRAAKRVVLVRHGQSTWNAEGRIQGSSDFSVLTNKGLSQAEISRQMLINDRFDACFASPLARSKRTAEIIWGAREEQIIPEYDLREIDLYSFQGLLKHEGQERFGSAFRQWQVDAVNFVIDGHYPVRELWERARSCWPKILAHDSRSVLVVAHNAVNQALIASAIGLGPEYFRSLLQSNCGVSVLDFIPRSEGGSPHICLNRLNQTPGSPIADEKSGGRETNKRIILVCHGSTLSNTEDGFSFAGDRPLDMLGVIQSQKSAELLLDLKVNSIISSPNKACVETAMAISKVQEAADCLGADCVPRHVELKQIGNLDIETIFQQSKMDISSFPTIQSGWLNRIEDVLKTTLWDQSKKIWQSVLDEISDESSTDVAVVVGHPAIHIALLGHCLNLTKEWFGSFHLDAGSISVLDFPEGPKGGGVVRCINYTAHLGRWSIPITRSAEDGE* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0422 505 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 68 77 IPR001345 GO:0003824
Lan13g0422 505 Gene3D - 64 266 IPR029033 -
Lan13g0422 505 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 424 503 - -
Lan13g0422 505 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 36 249 - -
Lan13g0422 505 CDD HP_PGM_like 283 482 IPR013078 -
Lan13g0422 505 Gene3D - 275 494 IPR029033 -
Lan13g0422 505 SUPERFAMILY Phosphoglycerate mutase-like 64 260 IPR029033 -
Lan13g0422 505 SUPERFAMILY Phosphoglycerate mutase-like 282 495 IPR029033 -
Lan13g0422 505 CDD HP_PGM_like 65 246 IPR013078 -
Lan13g0422 505 SMART PGAM_5 65 219 IPR013078 -
Lan13g0422 505 SMART PGAM_5 283 444 IPR013078 -
Lan13g0422 505 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 424 503 - -
Lan13g0422 505 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 36 249 - -
Lan13g0422 505 Pfam Histidine phosphatase superfamily (branch 1) 284 474 IPR013078 -
Lan13g0422 505 Pfam Histidine phosphatase superfamily (branch 1) 66 247 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0422 Lan-Chr13 3017391 3022471 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0422 K22200 - gmx:100794084 801.971