Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0417 ATGGTTGAATCACAGCCTAAGTTTTTCATACCAGAGTCAATTCATGGTGTGAGTACTGATCTAGCAGCACAGGTTCAGATGATATGGGATGTGATCAAAGCACCATTAGTAGTGCCTATGCTGAATGTTGGAGTGGTTATATGCTTAGTCATGGCCCTTATGCTCTTCTGTGAGAGGCTATATATGGGTATAGTCATAATCCTTGTTAAGCTCTTTTGGAAGAAACCAGAACAAAGGTACAAGTATGAGCCAATCCAAGATGATGTTGAAGTTGGTAGCTCAAATTTCCCTGTGGTCCTGATTCAAATTCCAATGTTTAATGAAAAAGAGGTTTACAAAGTGTCCATTGGAGCGGCTTGTGGACTTTCATGGCCTTCGGACCGTCTCGTGATCCAAGTCCTAGATGATTCTACTGACCCTGCCATCAAGCAATTGGTGGAGATGGAATGTCAAAGATGGGCAAGCAAAGGGTTAAACATAACATACCAAATCAGAGAGAATAGAACAGGTTACAAAGCAGGTGCTTTAAAAGAAGGACTAAAACGTAGCTATGTAAAACACTGTGAGTATGTGGCTATCTTCGATGCAGATTTCCGCCCAGAACCAGATTTTCTTAGGCGTGCCATTCCCTTCTTGGTTGGGAACCCTGACATTGCTCTTGTTCAAGCTCGCTGGAGATTTGTGAATTCGGATGAGTGTTTGTTAACAAGAATGCAAGAGATGTCACTAGATTACCATTTCACAGTGGAACAAGAAGTTGGGTCAGCCACTCATGCTTTCTTTGGTTTCAACGGGACAGCGGGTGTTTGGAGAATAGCTGCAATAAATGAAGCAGGTGGGTGGAAAGACAGAACAACTGTGGAAGATATGGACCTTGCTGTTCGTGCTAGCCTTAGGGGCTGGAAATTTATATACCTTGGAGATCTCCAGGCTAAAAGTGAACTTCCAAGTACTTTGAGAGCCTTTAGATTCCAGCAGCACCGATGGTCTTGTGGCCCAGCTAATCTATTCCGCAAAATGGTGATGGAGATAGTCAAGAACAAGAAAGTGAGGTTTTGGAAGAAAGTGTATGTTATATACAGCTTCTTCTTTGTTCGTAAAATCATAGCCCATATGGTCACCTTTTTCTTCTACTGTGTGGTTCTTCCCCTTACAATTTTGGTACCTGAGGTTCATGTTCCGATATGGGGCGCGGTTTATATTCCTTCCATCATCACCATTCTCAATTCAGTAGGAACACCAAGGTCCATTCATCTCTTGTTCTACTGGATCCTTTTCGAGAATGTGATGTCTCTGCACCGTACCAAGGCGACCTTAATCGGTCTTTTTGAAGCTGGCAGAGTCAATGAATGGGTTGTTACTGAAAAACTTGGGGACTCTGTCAATAATAATAAAAAAGATGCTGCCAAGAAGACTAATGTTAAAGCCCCCAAGAAAAGATCCAAAATTATTGAAAGGCTGAATTTGTTGGAGCTGGGATTTGCAGTCTTCCTCTTCATCTGTGGTTGCTATGATTTTGTGCATGGGAAAAACAACTATTTTATCTATCTCTTCCTTCAGACCATATCTTTCTCAATCGTCGGATTCGGCTATGTTGGCACCATCGTTTAA 1611 0.4215 MVESQPKFFIPESIHGVSTDLAAQVQMIWDVIKAPLVVPMLNVGVVICLVMALMLFCERLYMGIVIILVKLFWKKPEQRYKYEPIQDDVEVGSSNFPVVLIQIPMFNEKEVYKVSIGAACGLSWPSDRLVIQVLDDSTDPAIKQLVEMECQRWASKGLNITYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRAIPFLVGNPDIALVQARWRFVNSDECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFIYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVKNKKVRFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATLIGLFEAGRVNEWVVTEKLGDSVNNNKKDAAKKTNVKAPKKRSKIIERLNLLELGFAVFLFICGCYDFVHGKNNYFIYLFLQTISFSIVGFGYVGTIV* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0417 536 PANTHER - 5 536 - -
Lan13g0417 536 PANTHER BNAC09G36340D PROTEIN 5 536 - -
Lan13g0417 536 Pfam Glycosyl transferase family group 2 190 399 IPR001173 -
Lan13g0417 536 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
Lan13g0417 536 CDD CESA_CaSu_A2 97 333 - -
Lan13g0417 536 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 378 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0417 Lan-Chr13 2966301 2972103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0417 5 536 Miscellaneous Gene Families AT5G22740 81.495 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0417 K13680 - gmx:100802752 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1625 8 23208010 23214983 Lan13g0417 13 2966301 2972103 LSH