Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0412 ATGGAGAAGCTTTTTCATTCTGTAACTCTTCTTCTTCTATTCCTTGGACTACTATTTCATGGAGGAATGACAACATATATGAAGTCTCAAGATGAATCAGAGGAATGGGGTTATGTACAAGTCAGACCAAAAGCCCATATGTTCTGGTGGCTTTACAAAAGTCCCTATAGAGTGGAAAATCCCTCAAAGCCATGGCCAATTATTCTTTGGTTGCAGGGAGGACCTGGTGCTTCAGGAGTTGGGATTGGAAATTTTGAAGAGATTGGTCCTTTAGACACCTTTTTGAAGCCTAGGAATTCCACATGGTTGAAAAAAGCAGATCTTCTGTTTGTGGACAATCCAGTTGGAACTGGGTACAGTTTTGTGGAGAATGATGACCTCTTTGTGAAAACAGATGAGGAAGCAGCCACTGATTTGACTACATTGTTAATTAAGATATTCAACAGAGATGAGAGACTTCAAAAGAGCCCTCTATTCATTGTGGCAGAGTCTTATGGAGGCAAATTTGCTGTCACTCTTGGATTATCTGTCTTTAAAGCTATTCAAGAGAAGAGATTGAAGCTTATACTTGGAGGTGTGGCATTAGGAAATAGTTGGATCTCACCAGAAGATTTTGTGTTATCATGGGGTCCCCTGCTTAAAGACCTCTCACGAATTGATGAAAATGGACTTCAAGAATCAAACAAAATAGCTCTAAAGATCAAGCAACAACTCGAGAATGGTAAATTTGTTGATGCAACCAACTTATGGAGTGAACTTGAAACAGTGATTAGCAGTAGAAGCAACAATGTGAACTTTTACAATCTTTTGCTGGATTCTGGAAGTGATTCAGTAGCCTTATCAACAAAGGAGACAAGATTATTTAGAGAAATATCAAAAAAGCGGTATTCGAATTATCTTTCTTCCAAGAGGTTAAGGTTTTCTCCTGGTGGTAATGGTGATCTATCAAGTTTATTAAACGGTCCCATAAAGAAGAAATTAAGGATCATCCCTAAGAATGTCACATGGGGAGGGCAATCTGATCGTGTTTTTGATGTTCTTGAAGGTGAGTTTATGAAGCCAAGAATTAATGAGGTTGATGAGCTTCTGGCTAAGGGAGTCAATGTTACTGTGTACAATGGACAAGTTGATCTGATTTGTGCAACCAAGGGGGCCGAAGCTTGGATTAGGAAACTCAAGTGGGAAGGACTTAAAACATTTTTGGGGAAAGACAGAACACCCCTTTATTGTGAAACTGAGGAACATACCAAAGGCTTTTATAGGTCATACAAAAACTTAGACTTCTATTGGATCCTTGGAGCTGGCCATTTTGTACCCACTGATCAGCCATGCGTGACATTAGATATGGTGGCTGCAATCACACATTCACCTGCAACACAGAAGTGA 1386 0.3961 MEKLFHSVTLLLLFLGLLFHGGMTTYMKSQDESEEWGYVQVRPKAHMFWWLYKSPYRVENPSKPWPIILWLQGGPGASGVGIGNFEEIGPLDTFLKPRNSTWLKKADLLFVDNPVGTGYSFVENDDLFVKTDEEAATDLTTLLIKIFNRDERLQKSPLFIVAESYGGKFAVTLGLSVFKAIQEKRLKLILGGVALGNSWISPEDFVLSWGPLLKDLSRIDENGLQESNKIALKIKQQLENGKFVDATNLWSELETVISSRSNNVNFYNLLLDSGSDSVALSTKETRLFREISKKRYSNYLSSKRLRFSPGGNGDLSSLLNGPIKKKLRIIPKNVTWGGQSDRVFDVLEGEFMKPRINEVDELLAKGVNVTVYNGQVDLICATKGAEAWIRKLKWEGLKTFLGKDRTPLYCETEEHTKGFYRSYKNLDFYWILGAGHFVPTDQPCVTLDMVAAITHSPATQK* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0412 461 Gene3D alpha/beta hydrolase 21 460 IPR029058 -
Lan13g0412 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 8 456 IPR001563 GO:0004185|GO:0006508
Lan13g0412 461 SUPERFAMILY alpha/beta-Hydrolases 29 455 IPR029058 -
Lan13g0412 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 98 110 IPR001563 GO:0004185|GO:0006508
Lan13g0412 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 121 IPR001563 GO:0004185|GO:0006508
Lan13g0412 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 171 IPR001563 GO:0004185|GO:0006508
Lan13g0412 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
Lan13g0412 461 PANTHER CARBOXYPEPTIDASE 8 456 - -
Lan13g0412 461 Pfam Serine carboxypeptidase 32 453 IPR001563 GO:0004185|GO:0006508
Lan13g0412 461 ProSitePatterns Serine carboxypeptidases, serine active site. 160 167 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0412 Lan-Chr13 2850726 2854936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0412 K09646 - gmx:100808412 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0334 7 2274824 2278387 Lan13g0412 13 2850726 2854936 LSH
Lan8g1631 8 23293510 23294437 Lan13g0412 13 2850726 2854936 LSH