Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0409 ATGGCATTACCACACTCTACCTCTGCTTTAGCAACCATAGTAACACTTTCATCACCGATAACCAAATCTTTCAACTCTCTTCCCGTTTTATCCTTCACGAATGAACCTTTTTTCACGAAACAAACCATACCCAGAAGAAAAAAAAGACACTTTTCCCTAACCCCTTTACGCGTCGCTGCGCCAACAACAACAACAATTGAATCAGATCAATCGTATATAGAAGCACAAAGGGGCGATATTGATGATGAATTTGATGATGATACCTCGTCCTCCAAGTTTTCATGGAGGGATCACTGGTACCCAGTATCGTTAATTGAAGATCTGAACCCAGATTATCCCACACAGTTTCAGCTTCTGGGTCGTGAAATTGTGCTCTGGTACGATAAATTGAACTCACGATGGGTTGCTTTAGATGACAAATGCCCCCATCGTCTTGCCCCTTTATCTGAAGGAAGAATTGATGAAGATGGAAACTTGCAGTGTTCTTATCATGGATGGTCTTTTGATGGGTGTGGAAGCTGTGTTAAGATCCCTCAGGCTATGTCCGAAGGACCCGAAGCTCGCGCCGTTCGAGCTCCAAGAGCATGTGCTACTAGATTCCCTACCTTGGTATCTCAGGGCTTGCTCTTTGTTTGGCCTGATGAGAATGGTTGGGAGAAAGCTAATGCATCCAAACCTCCATTGTTGCCTGATGATTTTGAAAAACCAGAGTTTGCTACAGTGAACATTCAGCGTGATCTGTTCTATGGCTATGATACTCTCATGGAAAATGTCTCTGACCCTTCTCACATTGATTTTGCTCATCACAAGGTTACAGGAAGAAGAGACAGAGCCAAGCCTCTGACATTCAAGATGGATTCTCGTGGTCCGTGGGGCTTTGCAGGAGCTAATGATGGGAACCCAAAGATCAGTGCTAAATTTATTGCACCATGTTATTCTATGAACAAAATCGAGATCGATACCAAACTCCCAATAGTTGGGGACCAGAAATGGGTAATATGGATATGTTCATTCAATATCCCCATGGCGCCTGGTAAGACGCGATCCATTGTCTGCAGTGCTCGAAACTTCTTCCAGTTCACAGTGCCAGGGCCTGCCTGGTGGCAAGTGGTTCCGAGATGGTATGAACATTGGACTTCAAACAAAGTATATGATGGAGATATGATTGTTCTTCAAGGTCAAGAGAAAATATTTCTCTCAGCAACTAAAGACGGTGGTGACATTAATAAACAGTACACAAACATCACGTTCACACCAACACAAGCCGATCGCTTTGTCCTCGCATTCCGCAATTGGCTCAGACGACACGGCAACAGCCAACCAGAATGGTTCGGAACAGTCGATCAGCAGCAGTTGCCATCGACAGTTTTATCGAAACGTCAGATGATGGATAGATTTGAACAGCACACACTAAAGTGTTCATCATGTAAAAAAGCTTATGAGGCATTCCAAACATGGCAAAAAATCCTAATTGGTGCAACAGTTTTGTTTTGTGCAACATCAGGGATCCCATCAGATATTCAATTGCGTGTAATCTTGGCTGCACTTGCACTTGCCACTGCAGGCTTAGCTTTTGCCCTTAACCAACTCCAAAACAATTTTGTATTCGTGGATTATGTTCATGCTGATATTGATTAA 1638 0.4341 MALPHSTSALATIVTLSSPITKSFNSLPVLSFTNEPFFTKQTIPRRKKRHFSLTPLRVAAPTTTTIESDQSYIEAQRGDIDDEFDDDTSSSKFSWRDHWYPVSLIEDLNPDYPTQFQLLGREIVLWYDKLNSRWVALDDKCPHRLAPLSEGRIDEDGNLQCSYHGWSFDGCGSCVKIPQAMSEGPEARAVRAPRACATRFPTLVSQGLLFVWPDENGWEKANASKPPLLPDDFEKPEFATVNIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLTFKMDSRGPWGFAGANDGNPKISAKFIAPCYSMNKIEIDTKLPIVGDQKWVIWICSFNIPMAPGKTRSIVCSARNFFQFTVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLSATKDGGDINKQYTNITFTPTQADRFVLAFRNWLRRHGNSQPEWFGTVDQQQLPSTVLSKRQMMDRFEQHTLKCSSCKKAYEAFQTWQKILIGATVLFCATSGIPSDIQLRVILAALALATAGLAFALNQLQNNFVFVDYVHADID* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0409 545 Gene3D - 238 442 - -
Lan13g0409 545 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 29 545 - -
Lan13g0409 545 Pfam Rieske [2Fe-2S] domain 98 180 IPR017941 GO:0051537
Lan13g0409 545 SUPERFAMILY ISP domain 92 217 IPR036922 GO:0051537
Lan13g0409 545 Gene3D - 94 237 IPR036922 GO:0051537
Lan13g0409 545 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 99 211 IPR017941 GO:0051537
Lan13g0409 545 Pfam Pheophorbide a oxygenase 307 401 IPR013626 GO:0010277
Lan13g0409 545 SUPERFAMILY Bet v1-like 206 440 - -
Lan13g0409 545 CDD Rieske_RO_Alpha_PaO 88 222 - -
Lan13g0409 545 PANTHER PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC 29 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0409 Lan-Chr13 2812029 2816103 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0409 K13071 - gmx:100812162 948.347