Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0398 ATGGGCCATAAGAACAAAACTGACGGTGAAAACAACATGACAGCCACCGCCACCATCACGGTGGTCTTGAAGGTGGACCTCCACTGTGAAGGTTGCGCTTCCAAAATTACCCGCAACCTTCGTGCATTTCAAGGTGTTGAGACTGTCAAGGTGGAGAACGATACCGGAAAAATCACTGTCACCGGAATTTTGGACCCGGTCAGTGTGAGGGACAAGCTGGCTATGAAGACTAAGAAGAAGGTTGAACTTCTCTCTCCACAACCCAAGAAGGAGAAGGAAAATGAAAAGGAAAAGGAAAAGGAAAAAGAAAAAGAGAAAGACAATAAATCCAAAGAGAAAGAGCCTCCAGTGAACACGGTGGTTCTCAAGGTGCCACTGCACTGCCAGGGATGCATTGATAGGATTACCAAGATTGTCTACAAAACCAAAGGAGTTCATAACATGTCTATTGAGAAAGAGAAGGACACAATTAGTGTGAAGGGGGTAATGGATGTGAAGGCTTTGGTTGGAGATTTGATCATCAAGCTGAAGAGGAAGGTTGAGGTGGTCCCACCCAAGAAAGATAAGGGCAATGACAAGGAAGGTGAAAGTGGCGGTGGTGAAAAAGAAGGAGGAGGAGGCAAGAAAAAGAACAAGGGTGGTGGTGGTGGTGGAGGGGAAATGGAACAGGGGAAGATGGAGTATTTGGCACCTCCTGCTTTTGCTTTTGCATATCCATACCCATATGGCAATGCTGGAGGTGTTAATTATGCACCATTCTACCCAGAGAACTATCAATTGCATGCACCAGCACCACAGATTTTCAGTGATGAAAACCCAAATGCTTGTTCTGTCATGTGA 840 0.4571 MGHKNKTDGENNMTATATITVVLKVDLHCEGCASKITRNLRAFQGVETVKVENDTGKITVTGILDPVSVRDKLAMKTKKKVELLSPQPKKEKENEKEKEKEKEKEKDNKSKEKEPPVNTVVLKVPLHCQGCIDRITKIVYKTKGVHNMSIEKEKDTISVKGVMDVKALVGDLIIKLKRKVEVVPPKKDKGNDKEGESGGGEKEGGGGKKKNKGGGGGGGEMEQGKMEYLAPPAFAFAYPYPYGNAGGVNYAPFYPENYQLHAPAPQIFSDENPNACSVM* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0398 279 CDD HMA 121 161 IPR006121 GO:0046872
Lan13g0398 279 Coils Coil 89 114 - -
Lan13g0398 279 SUPERFAMILY HMA, heavy metal-associated domain 17 79 IPR036163 GO:0046872
Lan13g0398 279 Gene3D - 15 92 - -
Lan13g0398 279 MobiDBLite consensus disorder prediction 185 220 - -
Lan13g0398 279 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 8 279 IPR044594 GO:0046872
Lan13g0398 279 SUPERFAMILY HMA, heavy metal-associated domain 118 170 IPR036163 GO:0046872
Lan13g0398 279 MobiDBLite consensus disorder prediction 78 116 - -
Lan13g0398 279 Gene3D - 117 189 - -
Lan13g0398 279 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 8 279 - -
Lan13g0398 279 CDD HMA 22 82 IPR006121 GO:0046872
Lan13g0398 279 Pfam Heavy-metal-associated domain 23 71 IPR006121 GO:0046872
Lan13g0398 279 Pfam Heavy-metal-associated domain 122 180 IPR006121 GO:0046872
Lan13g0398 279 ProSiteProfiles Heavy-metal-associated domain profile. 27 60 IPR006121 GO:0046872
Lan13g0398 279 MobiDBLite consensus disorder prediction 185 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0398 Lan-Chr13 2726148 2727859 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0398 - - pvu:PHAVU_011G084200g 249.98