Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0386 ATGGGTTTTGGTAGAAACTCATCTGTGAGATCAAGTGGAGATTCCTTAGATGGAATGCTTAATGACTATGTTGTAGGAAAGAGCAAAATGAAGAATCAAAAAAGTGCTTCTACAAAATTTGTAGCAGCACTTACATGTCTTCAATTTTGCTTTGCAGTTTATGCAACATTCCTATTGTACTACATGGGTCCTTCTATTGATCTAAGAACCAATCCAGATTTCACTTGGGCTACAAGAATTGCACAACAATGGAAGCAACTCATGATCACACCCCATGTTGTTGGTCACTACCAACAAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCGTCAGGGAAGGATTTCAACCGATAAATCCTTCCCTTGTATGTGAGAACGAGAAGATTGATTTCATGCAAAAGAAGTCCAATGATGTACAAATGATCAAGTTGAAGAGAGAGCTATACAATGAGGTGTTGGATTTTCAAAGTAAGAATTTTGGAACTGAGACACTTTCTGAGTTAATGGCAATGAAATCCAAATGGGATTTGCATGGTCCTAAGAAGCCAAAAATTACTGTTTTATTAAACCACTTCAAGAGAAAAACACTTTGTGCTCAAATTGATTCTTTGCTCCAACAAACCCTCCCATTCTATCATGTTTGGGTGCTTTCATTTGGAAGCCCAAATGAGTTATCTTTGAAAAGAATTGTAGAGAGCTACAATGATTCAAGAATCAGTTTTATAAGCTCAAGCTATGATTTCAAGTACTATGGAAGGTTCCAAATGGCTCTTCAGACTGAGGCTGATTTGGTGTATATTGTTGATGATGATATGATTCCTGGTAAGAAGATGTTGCAGATTTTGGCACATGTGGCTGGGACAGAAAAGTACAAGAACTCTGTGTTGGGAAGTATTGGAAGGATATTGCCATTTAGACAGAAAGATTTCACATTTCCAAGTTACAGAAAGTTTAGGTCTAAAGAAGCAGGGCTTTATTTGCCTGATCCTGCTTATGATATCACAATTGATAAAATTGTGAAGGTGGACTTTCTATCCAGCTCTTGGTTTTTATCTGCTGAACTTGTCAAAACACTCTTCATTGAGACACCTTTTACCTTCTCAACTGGTGAAGATCTTCACCTCAGCTATCAGCTTCAGAAGTATAGAAATGCTGGGTCATATGTTCTTCCAGTAGACCCTAAAGACAAGGAAACATGGGGTGATAGTGAACACAGACTTGCATATGTGTCAGAAACCACAGTGATTTTCAAGGACATAGTTCAAGTAAGAGATGACCAATGGTGGAAAGCACTTTCCACAGGTTATGTGACACAGTGGGCAGCAATGCATCCTCAAAAGGTTGATGCACTCTTTTATGCTCACACAGTTGATGAAGTAAAAGCACTTGCACCTCTTCTTGAAAAGTTCAGGTTCACAGTTGGCAAAAAAGCCTACATTGTTGTATCTGGAGGAAACTTCTGTCCTTGTGAAAATGCTGCTGCAGCTCTTAAATGGCCTATGTTGGTTTGTAAAGAGAGGCGTTTTAAGATTTTCGATTTGGCGCTTGGAGCACTTTCTGGAGTGTCAAACTCAGAGGTGCCAGTAGTACAGGCAGTGTACTCCAGCATGAAGGGTTTGATCAAAATTCATAATCCTAGTGTGGTAATTACTGTAGCTGACATTGATCCTAATGTGAAAAAGGCTTTGAAGATGGCATCAGAAACAAATTCAAATGGTACCACACTTGTTCTTTTGCCCAGGGCTTCAGTGTCTAAAGTTCTTTGGATGGCTGATCTGCGTTCAACAGCATTACCAAATTGGAATAAGATGCATATTTCTATCAACATCATTACCCAAAACAGAGTTAATTCATTAGCAAGGCTTCTCAAGTCTCTCACCAATGCTTACTATCTTGGAGATGAAGTTCCTATTACCTTCAACATGGATAGCAAGGTAGATGAGGCAACTATAAAGTTACTAGGTTCATTGGAATGGCCTCATGGGCCTAAAACCTTAAGAAGAAGAATCATCCAAGGAGGGCTTATAAGAGCAGTGAGTGAGAGTTGGTACCCTTCTTCTGATGATGACTTTGGCCTCTTACTTGAAGATGACATTGAAGTTTCTCCATACTATTATTTATGGATCAAATATGCACTCTTGGCTTATCACTATGACCCTCAAGTTTCTCTCCCTGAACTCTCATCTATCTCTCTCTACACTCCAAGGATTGTTGAAGTTGTCAAAGAAAGGCCTAAATGGAATGCCACAGAGTTCTTCAAACCAATCCATCCCAACACACCTTACCTTCACCAATTACCTTGTAGTTGGGGAGCAGTGTTTTTCCCTAAGCATTGGAGAGAGTTCTATGTGTACATGAACATGAGGTTCACTGAGAATGCTAAGGAAAACCCGGTCCAAATTCCGAAGTCTAGAACAAATGGTTGGCAAGCTTCATGGAAAAAGTTCCTAATAGACATGATGTACCTTAGAGGGTATGTTAGTTTATATCCAAATTTCCCTAACCAAGCTAGCTTTTCAACCAACCATATGGAACCAGGGGCACATATTAGTGCTAAAGATAATGTGGTTAAGCATAACAAACAAGACTTTGAGGTGCCATTATTGAAGGAAGATTTTAGAAACTTTTTACCAAGAATGAAAATGCCTCCAGCATCAAAACTACCATCTTTGAATCTCTTCAACCAACCACTTTCTCTAAGGGGTCTTAAGGCTGCTGGAGCTAAGTTGGGTCAAGATGTGCTAAGATGTAACAATGTCACTGAGCTAGTAACTGTGGATCATCATACAGGTCTACCACAAAGTTGCACCAAATTCTGA 2820 0.3933 MGFGRNSSVRSSGDSLDGMLNDYVVGKSKMKNQKSASTKFVAALTCLQFCFAVYATFLLYYMGPSIDLRTNPDFTWATRIAQQWKQLMITPHVVGHYQQASSSSSSSSSLVREGFQPINPSLVCENEKIDFMQKKSNDVQMIKLKRELYNEVLDFQSKNFGTETLSELMAMKSKWDLHGPKKPKITVLLNHFKRKTLCAQIDSLLQQTLPFYHVWVLSFGSPNELSLKRIVESYNDSRISFISSSYDFKYYGRFQMALQTEADLVYIVDDDMIPGKKMLQILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITIDKIVKVDFLSSSWFLSAELVKTLFIETPFTFSTGEDLHLSYQLQKYRNAGSYVLPVDPKDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYVTQWAAMHPQKVDALFYAHTVDEVKALAPLLEKFRFTVGKKAYIVVSGGNFCPCENAAAALKWPMLVCKERRFKIFDLALGALSGVSNSEVPVVQAVYSSMKGLIKIHNPSVVITVADIDPNVKKALKMASETNSNGTTLVLLPRASVSKVLWMADLRSTALPNWNKMHISINIITQNRVNSLARLLKSLTNAYYLGDEVPITFNMDSKVDEATIKLLGSLEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALLAYHYDPQVSLPELSSISLYTPRIVEVVKERPKWNATEFFKPIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTENAKENPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQASFSTNHMEPGAHISAKDNVVKHNKQDFEVPLLKEDFRNFLPRMKMPPASKLPSLNLFNQPLSLRGLKAAGAKLGQDVLRCNNVTELVTVDHHTGLPQSCTKF* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0386 939 SUPERFAMILY Nucleotide-diphospho-sugar transferases 182 383 IPR029044 -
Lan13g0386 939 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 170 394 IPR029044 -
Lan13g0386 939 PANTHER - 28 939 - -
Lan13g0386 939 CDD Glyco_tranf_GTA_type 195 286 - -
Lan13g0386 939 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 605 854 IPR029044 -
Lan13g0386 939 SUPERFAMILY Nucleotide-diphospho-sugar transferases 603 790 IPR029044 -
Lan13g0386 939 PANTHER OSJNBA0004B13.7 PROTEIN 28 939 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0386 Lan-Chr13 2605885 2610151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0386 - - gmx:100790938 1700.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0305 7 1977317 1981702 Lan13g0386 13 2605885 2610151 LSH