Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0321 ATGGGTAGCCCCAAGAAGAATGAAGAAAGTAAGGGTTTTTTTGCCGCCATGTCTTCTGGCTTGTCCATGTTCAGCAACGCTATGCATCGATCTGTTAACGGGATGCTGGGGTATGAAGGTGTAGAAGTAGTAAATCCAGAGGGAGGTAAAGACGATGCAGAGGAGGAAGCTCAGAGAGGAAGATGGAGACAAGAGGAAAGAGATAGTTACTGGAAGATGATGCAAAAATACATTGGCTCAGATGTAACATCAATGGTGACACTACCAGTTATTATCTTTGAACCGATGACAATGCTCCAGAAAATGGCCGAGTTAATGGAGTACTCCTACTTGTTAGACCGGGCAGATGAATCAGAGGATCCATATATGCGGTTGGTGTATGCATCATCATGGGCTATATCTGTGTACTTTGCATACCAACGAACCTGGAAGCCTTTTAATCCTATCCTTGGAGAGACTTATGAAATGGCTAACCATGGTGCGATTACATTTCTTGCAGAACAGGTGAGTCATCATCCCCCAATGAGTGCAGGGCATGCTGAGAATGAGCATTTTACATATGATGTGACTTCAAAGTTAAAAACTAAGTTTTTGGGGAATTCTGTTGATGTTTATCCTGTTGGAAGAACACGTGTGACGCTCAAGAGGGATGGTGTAGTCTTAGATTTGGTGCCACCTCCTACTAAGGTTCACAATCTGATATTTGGCCGTACTTGGATTGATTCACCTGGAGAAATGATAATGACAAATTTGACAACTGGAGACAAAGCTGTTCTATACTTTCAACCATGTGGATGGTTTGGTACTGGTCGCTATGAAGTGGATGGATATATTTATAATTCTTCTGAGGAACCTAAAATATTAATGACCGGAAAGTGGAATGAAAGAATGAGTTATCAACCTTGTGATTCAGATGGAGAGCCTCTTCCAGAGACAGAAATGAAAGAGGTTTGGCATGTTGCTGATGTTCCACCAAATGATAAATTCCAGTATACATATTTTGCTCATAAAATAAACAGTTTTGACACTGTCCCTGGAAAGTTGCTTGCATCAGACTCTCGTCTACGCCCAGATAGATATGCACTTGAGATGGGTGATCTGTCAAAAGCTGGGAATGAAAAGAGCAGTTTGGAGGAGAAGCAGCGCGCTGAAAAGAAAACACGAGAGGCCAAAGGGCACAACTTTAAACCAAGATGGTTCGATTTAACTGAAGAAGTGACACCAACTCCTTGGGGAGATTTGGAGATCTACCAATATAATGGTAAATACACTGAACATCGAGCTGCTGTTGATAACTCAGGCAGCATTGAAGGTGACGTTAAATCAATTGAGTTCAATCCATGGCAGTATGGTAACTTGTCTACGGAATGA 1371 0.4194 MGSPKKNEESKGFFAAMSSGLSMFSNAMHRSVNGMLGYEGVEVVNPEGGKDDAEEEAQRGRWRQEERDSYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDRADESEDPYMRLVYASSWAISVYFAYQRTWKPFNPILGETYEMANHGAITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGEMIMTNLTTGDKAVLYFQPCGWFGTGRYEVDGYIYNSSEEPKILMTGKWNERMSYQPCDSDGEPLPETEMKEVWHVADVPPNDKFQYTYFAHKINSFDTVPGKLLASDSRLRPDRYALEMGDLSKAGNEKSSLEEKQRAEKKTREAKGHNFKPRWFDLTEEVTPTPWGDLEIYQYNGKYTEHRAAVDNSGSIEGDVKSIEFNPWQYGNLSTE* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0321 456 Gene3D - 151 329 - -
Lan13g0321 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 453 - -
Lan13g0321 456 ProSitePatterns Oxysterol-binding protein family signature. 167 178 IPR018494 -
Lan13g0321 456 Gene3D - 359 444 - -
Lan13g0321 456 SUPERFAMILY Oxysterol-binding protein-like 64 434 IPR037239 -
Lan13g0321 456 MobiDBLite consensus disorder prediction 365 390 - -
Lan13g0321 456 MobiDBLite consensus disorder prediction 372 390 - -
Lan13g0321 456 Pfam Oxysterol-binding protein 69 427 IPR000648 GO:0008289
Lan13g0321 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 453 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0321 Lan-Chr13 2115986 2121403 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0321 - - gmx:100779808 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0233 7 1444932 1450536 Lan13g0321 13 2115986 2121403 LSH
Lan6g1983 6 30711154 30716346 Lan13g0321 13 2115986 2121403 PCT
Lan13g0321 13 2115986 2121403 Lan6g1983 6 30711154 30716346 PCT