Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0312 ATGTCGGGTGGTTTCTTTCGCGGTACTTCTGCGGATCAAGACACTCGGTTTTCGAACAAGCAAGCGAAGCTGCTGAAATCGCAGAAGTTTTCGCCTGAATTGGAGCATCTGGTGGACATGAGCAAGGTGAATATGGAAGTGATGAAGCCTTGGATTGCCAAAAGGGTGACGGAGCTTCTTGGCTTTGAAGATGAAGTTCTCATTAACTTCATACATGGTCTTCTGGATAAGAAGGAAGCAAATGGGAAAGAGGTTCAAATTCAAATTACTGGATTTATGGAGAAAAACACTGGAAAGTTCATGAAAGAGCTATGGACACTTCTGCTTAGTGCGCAGAAAAATGCCAGTGGCATTCCTCAGCAGTTCTTGGATGCCAAAGAAGAAGAATTACAGAAGAAGAAGGCTGAGAATGATAGGATAACAAGTGAAATTCAAAAGAAAAAAGATATCGAAGGCAGAGAAATTATGGAAGAGAAAGAGAGGTTGAAAAAACTGGCTGCTGGATTGGATATGAAGATTAATGATACTGCTTCAGACCCAACCGTGAAACCCAGGGATTCAGGGCAATATATTCATGATGGGAAAGAGTCTGACAAGAGGAATGGTGTTAGAGCAAGGAACAGGTCAAGGAGTATATCCAGGTCACCAGAAGCTCGAGCGCGCTCTGTTTCTTCTGAAAGGATTCGTCGCTCTCCACGACGGCATTCTATTTCTCCTCGGAGGCGTTCGCCATGGAGATCTCACAGGGGGGCTTATTTACTGCAAAGATCCAGATCCCGCTCAAACTACAGATCTCCTTCTCCTATACGACATAGAATGCATTCTCCATATTATCACGATTCACCTTTTCGCCGCCGCAGAACACCCTCTCCTACTAAAAGACGCAGATCACCTTCTCCAGCACGTCGACACAGATCACCTTCTCCAGCACGTCGACACAGGTCACCTTCTCCAGCACGTCGACGCAGATCACCTTCTCCAGCACGTCGACGCAGATCACCTTCTCCAGTACGTCGACGTAGATCACCTTCTCCAGCACGTCTACGCAGATCACCTTCTCCAGCACGTCGACGCAGATCACCTTCTCCAGCACGTCGACACAGATCACCACCACCAATGAGACGGCGAAGGTCACCCTCACCTGTTCAACGAAGATCTCCTGTGATGCGGGGTAGGTCGCCTTCACCTGTGCGCCGGCCACCGATACGTGTATGGCGCAGATCAGACTCTCCCATGCAATCCCCCTCTCCCATACGACGAAGGTATGGCAGTAGATCTCCACGACGCAGGTCTCCATCTCCTTTGCGGCGTAGATCACCTGTTTCTGGTAAGAAAAGATCACCAAGTCTCTCTCCACGGAGGTCCCTTTCTCCTGATGAATGGAGTTCTCAGTCCCCCACACGGCGTGTATCTCCATCTCCAGTTAGGAGAAACTCTCCGATACGCCAGAGGAATTCTCCTGTCAGAGTTCAAGAGAAATTGTCACCTGAGATACATCAACACTCTAGACCTTTGCAGTCTGGACAGAGAGATAAGGATAGCAAAGCTTCACACCTTAATTCTGAAGATTCAATGTCGACACCTGAGAAGTTTCCAATTCGACCAGTATCTCCACAAGCAATGAGTAGGACCAGTAGTGAAGATAGGAGCCCACGTAAGAGCCCGAGGCAAAGAAGAGAGAGGTTGACCGATGAAAGAGGCTCAAGCCCTCCAAAGAAACCAAGATCTCAGAGACCTAGCCATGACAGCCCAGAGAAGAGTAAGGGAGCAGAAGAAACATATTATTATAGAGAGAGCAGACATCTTAAAACAACATCACCACAAAGGAAATCAAAATATTCATCCCCAGTCAGTAAGCAAAACGATTCGCCAGCAAAGTTTCATGATGAGGATGAGTTCTCTCCTGAAAGGGCAACTGGCCACCTGACACCAAAATATCATCATTATGATAACATTGATCATAGAAAGAAAATCAGGGAGATAAAACGTGATAGAACTCCAGGGGAGGGGGGTGAATCTCCTTCTCAACAGAAGTCACCAATGAACACACAGATTCTTTCCAGCAAGAAGCCTCGTGAGACCTATGCTGCGGATATTAAAAAACCTGATGACAAGAATCTCTCACATTCAAACTATGCTAAAAATAGTGATCGGGGCCACAAATCAGAAGCCACTCAAGATTTAGTTAGAAAAGTTGATCGTGCCAATCATAATGCTTCATATGATTCTGTTTCTGAGGAAAGTGATAAGAATAGAAAGGATAGGAGAAAGCAGAAAAGGTCTGAGAAGAAATTTGTGTCCTCAGATGAAGATTATAGTTCTGATTCCGAGTTAGAGGACAGGAAAGAGGCTAAGAGGAAGAAAAGGGAGGGGAAGAAGCAGCGGAAGGAGGAAAAGCGTCAAAGACGTGAAGAGAGACGACACAGAAGGGAAGAACGGCGTGCAGAGAAGCTGAGAGTGAAGAGTAGACCAGCTTATATTTCTGAAGATGAGGAAGCTGAAAGATTGGATCGAAGTGATAATGAAGAGACATTGTCTGAGCAAAAGAAACTTGAGATAGAGTTGCGGAATAAGGCTCTTGAATCCCTCAAAGCAAAGAGGGGCATGGATAACTAA 2616 0.461 MSGGFFRGTSADQDTRFSNKQAKLLKSQKFSPELEHLVDMSKVNMEVMKPWIAKRVTELLGFEDEVLINFIHGLLDKKEANGKEVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGIPQQFLDAKEEELQKKKAENDRITSEIQKKKDIEGREIMEEKERLKKLAAGLDMKINDTASDPTVKPRDSGQYIHDGKESDKRNGVRARNRSRSISRSPEARARSVSSERIRRSPRRHSISPRRRSPWRSHRGAYLLQRSRSRSNYRSPSPIRHRMHSPYYHDSPFRRRRTPSPTKRRRSPSPARRHRSPSPARRHRSPSPARRRRSPSPARRRRSPSPVRRRRSPSPARLRRSPSPARRRRSPSPARRHRSPPPMRRRRSPSPVQRRSPVMRGRSPSPVRRPPIRVWRRSDSPMQSPSPIRRRYGSRSPRRRSPSPLRRRSPVSGKKRSPSLSPRRSLSPDEWSSQSPTRRVSPSPVRRNSPIRQRNSPVRVQEKLSPEIHQHSRPLQSGQRDKDSKASHLNSEDSMSTPEKFPIRPVSPQAMSRTSSEDRSPRKSPRQRRERLTDERGSSPPKKPRSQRPSHDSPEKSKGAEETYYYRESRHLKTTSPQRKSKYSSPVSKQNDSPAKFHDEDEFSPERATGHLTPKYHHYDNIDHRKKIREIKRDRTPGEGGESPSQQKSPMNTQILSSKKPRETYAADIKKPDDKNLSHSNYAKNSDRGHKSEATQDLVRKVDRANHNASYDSVSEESDKNRKDRRKQKRSEKKFVSSDEDYSSDSELEDRKEAKRKKREGKKQRKEEKRQRREERRHRREERRAEKLRVKSRPAYISEDEEAERLDRSDNEETLSEQKKLEIELRNKALESLKAKRGMDN* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0312 871 MobiDBLite consensus disorder prediction 422 443 - -
Lan13g0312 871 MobiDBLite consensus disorder prediction 670 690 - -
Lan13g0312 871 MobiDBLite consensus disorder prediction 743 786 - -
Lan13g0312 871 Coils Coil 123 150 - -
Lan13g0312 871 MobiDBLite consensus disorder prediction 546 605 - -
Lan13g0312 871 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 360 867 - -
Lan13g0312 871 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 387 - -
Lan13g0312 871 MobiDBLite consensus disorder prediction 288 381 - -
Lan13g0312 871 MobiDBLite consensus disorder prediction 623 669 - -
Lan13g0312 871 MobiDBLite consensus disorder prediction 444 490 - -
Lan13g0312 871 MobiDBLite consensus disorder prediction 693 737 - -
Lan13g0312 871 MobiDBLite consensus disorder prediction 186 232 - -
Lan13g0312 871 MobiDBLite consensus disorder prediction 254 268 - -
Lan13g0312 871 Coils Coil 781 821 - -
Lan13g0312 871 MobiDBLite consensus disorder prediction 608 622 - -
Lan13g0312 871 SUPERFAMILY PWI domain 25 133 IPR036483 GO:0006397
Lan13g0312 871 Gene3D PWI domain 33 125 - -
Lan13g0312 871 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 360 867 - -
Lan13g0312 871 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 1 387 - -
Lan13g0312 871 MobiDBLite consensus disorder prediction 174 849 - -
Lan13g0312 871 MobiDBLite consensus disorder prediction 797 849 - -
Lan13g0312 871 SMART pwi_2 40 114 IPR002483 GO:0006397
Lan13g0312 871 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Lan13g0312 871 MobiDBLite consensus disorder prediction 273 287 - -
Lan13g0312 871 Pfam PWI domain 46 115 IPR002483 GO:0006397
Lan13g0312 871 MobiDBLite consensus disorder prediction 494 519 - -
Lan13g0312 871 Coils Coil 841 861 - -
Lan13g0312 871 MobiDBLite consensus disorder prediction 233 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0312 Lan-Chr13 2043258 2049094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0312 K13171 - gmx:100810238 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0222 7 1378108 1383950 Lan13g0312 13 2043258 2049094 LSH
Lan8g1734 8 24103523 24108841 Lan13g0312 13 2043258 2049094 LSH