Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0275 ATGGAAAGAATGGAAGATTTGGTTGTGAATGAAATTGTGAAAAAGTTAGCAGCTGAAGACATTGGCAAAGTTGCTTGTGTGAACAAACGCTTCAACTTTCACTGTTCTGAAGAACCTCTTTGGATTCATCTCTGCTTTCATGATCTCTCTTTGACTCAACCCCGAGATCATCTCGGAAACCCTCTCCCTTCCTTCAAGGAAACTTATCAAAAATGGAGAGAAGCTTTTGTTATGTATCCTTGGCCCCTTGTCAAGCGTGTGAAAAGGTGTTGGGACACAATAAAGACTTGGCTCACCAATAATTTTCCGGAAGCGGAGGCCACACTTTGTAAAGGTGCATCAGAAGCTGAGATTCAAGAGTTGGAGAGCGCTTTAAATGTGAAACTGCCTCTTACTACTAGGATTCTCTATCGTTTTCATAATGGCCAAGAAATTACAAAAGAAGATATGGAAGATAGTACATTTTACAGTTCTCTAGGCCTAATTGGTGGGTACTCGTTCTATAGTCATTTCGTGAATGTGTATCTATTGCCTATAAGTCAGGTAATCCAAGAAACTCGGAGAATTACGCGTCACTTAGGCTTTTTCAGGAGATCCAAGTATGTTCTTGTAGCTGCTTCGTTCACGTACATTGAAAAGTTGTTTTTCCTCAACTGTACAAATGGTCAACTATATGTTGGAACCAGGAACTTTCCTGATAATGGAGAAATGATCCCTTGCGTTCCACATGATCTGATTAGTTTAGATCATGAAGTGAACAGTGAGCAGCAACAGGATGCTATGCTACTGTGGTTAGAAGAACATGGTCGCCGTTTACAACATGGCTTTATCAAACTTCTTGAAGAAGGAAATACCAGAAGCATTAATCTTTTTCCAGAACAGCCCCCTATTTGTTCAATGGCTGTAACGAATGGCGTGCAGGTTCGTGCTTCTGCGTTGTTAATCCCTGAGTTGGCTGATCTTCAAGATGACGTTGAAAAGTATTTATTTGCTTATTCAATCCGCATGTCCCTTGAACCCCAAGGATGTGTCATCAACGGGATGCCCTTCAGCTCTTGCCAGCTCCATTGGAGGCACTGGGTCATCCGTTCCAATGATATCGTAGTATCTGATGTCAATGGAGAAGCTGTTATTGGAATGTTCCCTCTATTGTGTCCTGGTGATAAAGAATTTGTTTATCAGAGTTGCACGCCTCTACCAACTTCGTCGGGTTCGGTTGAAGGTTCTTTTACATTTGTACCTGGCAGACTGGCAGAGCCAAAAGGAGGTCCTTTCGAAGTGACAGTGGCGCGTTTCCCGCTCCAGGTGCCAGACTATGTTTTCTGA 1326 0.4253 MERMEDLVVNEIVKKLAAEDIGKVACVNKRFNFHCSEEPLWIHLCFHDLSLTQPRDHLGNPLPSFKETYQKWREAFVMYPWPLVKRVKRCWDTIKTWLTNNFPEAEATLCKGASEAEIQELESALNVKLPLTTRILYRFHNGQEITKEDMEDSTFYSSLGLIGGYSFYSHFVNVYLLPISQVIQETRRITRHLGFFRRSKYVLVAASFTYIEKLFFLNCTNGQLYVGTRNFPDNGEMIPCVPHDLISLDHEVNSEQQQDAMLLWLEEHGRRLQHGFIKLLEEGNTRSINLFPEQPPICSMAVTNGVQVRASALLIPELADLQDDVEKYLFAYSIRMSLEPQGCVINGMPFSSCQLHWRHWVIRSNDIVVSDVNGEAVIGMFPLLCPGDKEFVYQSCTPLPTSSGSVEGSFTFVPGRLAEPKGGPFEVTVARFPLQVPDYVF* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0275 441 Gene3D ApaG domain 298 440 IPR036767 -
Lan13g0275 441 PANTHER F-BOX PROTEIN SKIP16 1 441 - -
Lan13g0275 441 Gene3D - 89 269 IPR037883 -
Lan13g0275 441 ProSiteProfiles ApaG domain profile. 300 441 IPR007474 -
Lan13g0275 441 Pfam ApaG domain 322 413 IPR007474 -
Lan13g0275 441 PANTHER F-BOX PROTEIN SKIP16 1 441 - -
Lan13g0275 441 SUPERFAMILY ApaG-like 302 441 IPR036767 -
Lan13g0275 441 SUPERFAMILY SMI1/KNR4-like 90 145 IPR037883 -
Lan13g0275 441 Pfam SMI1 / KNR4 family (SUKH-1) 112 169 IPR018958 -
Lan13g0275 441 SUPERFAMILY F-box domain 8 76 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0275 K10290 - gmx:100809876 697.582