Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0270 ATGGCCGTCAACGATGCTGATCAATCAAACAAGTCTCACAGGATCCGTCAATCTGGCGCCAAAAAGGACAAGAAGAAGCTCAAGAAGAAGAAGCAGCAAGATTCTGATGATGATGATCAGAAACAGCTTAACCCTAAGGCATTCGCTTTTTCTTCCTCCAACAAAGCCAAGCGTTTGCAATCACGCGCCGTCGAGAAAGAGCAGCGCCGTCTTCACGTTCCCATCATTGACCGCTCTTATGGTGAACCTGCTCCTTTCGTCATCGTTGTGCAGGGTCCACCCCAGGTTGGGAAGTCACTGTTGATAAAGTCTCTGGTTAAACATTATACGAAACAAAATTTACCTGAAGTTCGAGGTCCAATTACTATTGTGTCAGGAAAGCAAAGGCGGCTGCAATTTGTCGAATGTCCAAATGATATCAATGGCATGATAGATGCAGCAAAGTTTGCTGATCTAGCACTGCTTCTTGTAGATGGGAGTTATGGTTTCGAAATGGAAACCTTTGAATTCCTGAACATTTTGCAAGTTCATGGGTTCCCAAAGGTCATGGGGGTTCTTACTCATCTTGATCAGTTCAAGGATGCGAAAAAGTTGAGGAAAACAAAGCAACTCATTCCAATGCTAAAAAAATATTTGGATTTTGTGAGAGTTGTTTTTTTGGGTTTGGAGTTTAGTTTAGACATTGGAGCAGGTCTTAGTTCTGTTAATGACCATGTTGTTTCATTTCAAACAGCATTATGGTATTGGATGCAAAATGTTCGCCCTGTTATTAACCAAGGATTTGGTGCAACCATTAGAGCTATTAATGGACAACTTCAATGTCATGGGGCTAATCCAAACACAGTTCAAGCTCGTCTTAATTATTATACTCAATATTCTTCACAATTAGGTGTTGCTACTGGTCATAATCTTACTTGCTAA 921 0.4115 MAVNDADQSNKSHRIRQSGAKKDKKKLKKKKQQDSDDDDQKQLNPKAFAFSSSNKAKRLQSRAVEKEQRRLHVPIIDRSYGEPAPFVIVVQGPPQVGKSLLIKSLVKHYTKQNLPEVRGPITIVSGKQRRLQFVECPNDINGMIDAAKFADLALLLVDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDQFKDAKKLRKTKQLIPMLKKYLDFVRVVFLGLEFSLDIGAGLSSVNDHVVSFQTALWYWMQNVRPVINQGFGATIRAINGQLQCHGANPNTVQARLNYYTQYSSQLGVATGHNLTC* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0270 306 MobiDBLite consensus disorder prediction 29 43 - -
Lan13g0270 306 Gene3D - 226 306 - -
Lan13g0270 306 MobiDBLite consensus disorder prediction 1 65 - -
Lan13g0270 306 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 84 241 IPR030387 -
Lan13g0270 306 CDD chitinase_GH19 236 306 - -
Lan13g0270 306 Pfam Chitinase class I 259 306 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lan13g0270 306 Gene3D - 82 223 IPR027417 -
Lan13g0270 306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 219 IPR027417 -
Lan13g0270 306 SUPERFAMILY Lysozyme-like 236 306 IPR023346 -
Lan13g0270 306 ProSitePatterns Chitinases family 19 signature 2. 240 250 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lan13g0270 306 PANTHER RIBOSOME BIOGENESIS PROTEIN BMS1 HOMOLOG 7 204 - -
Lan13g0270 306 PANTHER RIBOSOME BIOGENESIS PROTEIN 7 204 IPR039761 GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0270 Lan-Chr13 1710077 1715681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0270 237 306 Glycoside Hydrolase AT3G54420 70.000 1.95e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0270 K14569 - lang:109363494 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0270 13 1710077 1715681 Lan13g0270 13 1710077 1715681 ECH