Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0258 ATGGAAGAAGAGGGAATAGGGTTGGTGTTAGCGAGAGCCATAGAACTGAGATTGAAAATCAGCAATTGCATCCACACAGCCACCACCACTCCCAATGGAGATGATGATGATGATGATGATGAAACTACTCAAAGGCTTATCAACATTTGTAATGCCCTTGAAGCTTTGGAGACCCAGCTTTCTTCATTGCAGGTTTTGCAACAACAGCAGAGATATGAAAGAGAAGTTGCCTTGACTGAGATTGAAAACAGCCGCAAAATGTTAACCGATAAGCTCAAGGAGTACCAAGGTAAGGAATTGGAAGTGATACATGAAGCTTGCTCTTTTGCAAGTGAAAGGGTGGAGCCCAACAATGATCTACTACTTCCTCCATATCCAAGCCGCCCTCCATACTCTATGCGTCTGGACAAGGAATATCAGCCACATATCCCTTCTGTGAATAAGTATGATCACAATGGATTAATCACACATGATCCGATGATTGAGGCAAAAAAGAGTACAAGTGAAAAAGAGCAAAATCATGTTAACGATGAGGGTAAAAATCCAAGAAGAGGATGGGGATTATTTATAGCTCGTTTATCTAAAACAGTTGTTACAGTTGTTGGTGTGGTATCAATATTAACTTTGTCTGGCTTTGGACCTAATTTTGGCAAGGTTGGTATCCGCTTCAATGTACAAGGCTTGCGGCAACAAACAGAAAATGAGAAAGAAATACGTGCCAGTGAAAATGAGGGTGTGGTACCAATTACTCAGTGTCCACCTGGGAGAGTTTTGGTGATGGAGAATGGGGAGGCTCGATGTCTTGTGAAAGAGAGGATTGAAATTCCTTTTTCAGCTGTTGCTGCAATACCTGATATATACTATGGCTCTGGTATGGCCATTTGTTTTGAAAATGGGGGATTTATTTGTGGCCTTCTGGCCTTGGGACTTTTGAGTTTTGACCGCGACCCTAAAGTGGACAATTTCATTTCCTATAAGAACTTGTTCATAGCAAACTCCAAAATTTCACTCATCCACTCCCATCACAATTCACAAACCAACACCTTAGCAGTTAGCATATCTGAGATCATGAGCACCCTGGAAGTAAGAGGTTTCACTGAAGAGCAAGAAGCTCTGGTTGTGAAGTCTTGGAATGCAATGAAGAAGAATTCTGGAGAGCTTGCTCTCAAGTTTTTCTTGAAAATATTTGAGATTGCTCCATCAGCACAGAAAATGTTCTCATTCTTGAAAGACTCACAAGTTCCCTTGGAGAAAAACCCAAAGCTCAAAACTCATGCCCTCTCTGTCTTTGTCATGACTTGTGAATCAGCTGTTCAACTGAGGAAGGCTGGTAAGGTCACCGTGAGAGAATCGACCTTGAAAAAGTTAGGTGCTAGCCATTTGAAAAATGGAGTAGTAGATGAACACTTCGAGGTCACAAAGTTTGCACTTTTAGAGACCATAAAAGAAGCTGTGCCTGAAATATGGTCACCTGCCATGAAGGATGCATGGGGAGAAGCTTATGACCAGCTGGTTGGTGCCATCAAATCAGAAATGAAACCATCTTCTTAG 1551 0.4184 MEEEGIGLVLARAIELRLKISNCIHTATTTPNGDDDDDDDETTQRLINICNALEALETQLSSLQVLQQQQRYEREVALTEIENSRKMLTDKLKEYQGKELEVIHEACSFASERVEPNNDLLLPPYPSRPPYSMRLDKEYQPHIPSVNKYDHNGLITHDPMIEAKKSTSEKEQNHVNDEGKNPRRGWGLFIARLSKTVVTVVGVVSILTLSGFGPNFGKVGIRFNVQGLRQQTENEKEIRASENEGVVPITQCPPGRVLVMENGEARCLVKERIEIPFSAVAAIPDIYYGSGMAICFENGGFICGLLALGLLSFDRDPKVDNFISYKNLFIANSKISLIHSHHNSQTNTLAVSISEIMSTLEVRGFTEEQEALVVKSWNAMKKNSGELALKFFLKIFEIAPSAQKMFSFLKDSQVPLEKNPKLKTHALSVFVMTCESAVQLRKAGKVTVRESTLKKLGASHLKNGVVDEHFEVTKFALLETIKEAVPEIWSPAMKDAWGEAYDQLVGAIKSEMKPSS* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0258 516 PANTHER PLASTID DIVISION PROTEIN PDV2 1 291 - -
Lan13g0258 516 ProSiteProfiles Globin family profile. 365 513 IPR000971 GO:0020037
Lan13g0258 516 CDD class1_nsHb-like 365 513 - -
Lan13g0258 516 PRINTS Plant globin signature 366 383 - -
Lan13g0258 516 PRINTS Plant globin signature 391 411 - -
Lan13g0258 516 PRINTS Plant globin signature 419 447 - -
Lan13g0258 516 PRINTS Plant globin signature 484 510 - -
Lan13g0258 516 SUPERFAMILY Globin-like 361 513 IPR009050 -
Lan13g0258 516 Coils Coil 78 98 - -
Lan13g0258 516 Pfam Globin 390 508 IPR000971 GO:0020037
Lan13g0258 516 Gene3D Globins 364 511 IPR012292 GO:0019825|GO:0020037
Lan13g0258 516 ProSitePatterns Plant hemoglobins signature. 419 430 IPR019824 GO:0019825|GO:0020037
Lan13g0258 516 PANTHER PLASTID DIVISION PROTEIN PDV2 1 291 IPR038939 GO:0010020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0258 Lan-Chr13 1631027 1635080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0258 - - lang:109363491 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0258 13 1631027 1635080 Lan13g0258 13 1631027 1635080 ECH