Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0250 ATGGCAGTTCATAAACCTGGAAATTTCACATTTGGAGCAAAACATCAGGCTTTAACTCCATTGAGAGTTCTAAGGGGTCTGGTGTGTCTACTGGTGATGTTTTCAACAGCATTTGTAATGTTAATCTTCTTTGGCTTTATTAGCGCTACCGTAGTACGGTTTTTTAGCATTAATTACAGCAGGAAAGCAACCTCCATATTCTTTGGTGCTTGGCTAGCTTTGTGGCCTTTTCTATTTGAAAAGATCAACAAGACTAAAGTTGTGTTTTCTGGAGACACTGTTCCTTCAAGAGAGCGGATCCTGCTGATTGCGAATCATAGAACTGAAGTTGATTGGATGTATTTATGGGATTTTGCCTCACGGAAGGGATGCCTTGGATGCATAAGGTATATACTTAAGAGCAGTTTGATGAAACTTCCAATTTTTGGTTGGGCATTTCACATACTGGAATTCATCCCTGTGGAAAGGAAGTGGGATGCCGATAAGTCAACCTTGAACCATATGCTTTCTACATTCAAGGATCCCCAAGATCCTCTCTGGCTTGCTCTTTTCCCTGAAGGCACCGATTTTACTGAGCAGAAGTGCCTCCGGAGTCAAAAATATGCAGCCGAACATGGGCTACCAATCCTGACTACTGTTTTACTTCCAAAGACAAAGGGTTTCTGCACCTGTATTCAAGAGTTAAGGGGCTCCCTTGATGCAGTCTATGATGTTACCATTGGCTACAAATACCGCTGCCCGTCTTTCTTGGACAATGTCTTTGGGCTGGCTCCTGCTGAAGTTCATATTCATATCTGCCGATTTCTGTATGATAGTATCCCAGTATCTGAAGATGAAATGTCAAACTGGCTGGTAGAAAGATTCCGGTATAAGGACCACTTGCTGTCCATTTTTCAAGCTCAAGGTCAGTTTCCGGATCAAGCAACAGAAAGGGACCTCTCTGCTGGGAAGAGCATTTTGAATTGTGTTGTGGTTATTATGTTGACCACCACATGCATGTACTACACTTTTTCCTCTGCCTGGTTTAAACTGTATGTGTCTTTAGTCTGTGCTTATTTGGTTCCGGCTACATATTTCAATATTCGGCCCCAGCCGATTCTTGGCGTTTTGAAGAAGTGA 1119 0.4254 MAVHKPGNFTFGAKHQALTPLRVLRGLVCLLVMFSTAFVMLIFFGFISATVVRFFSINYSRKATSIFFGAWLALWPFLFEKINKTKVVFSGDTVPSRERILLIANHRTEVDWMYLWDFASRKGCLGCIRYILKSSLMKLPIFGWAFHILEFIPVERKWDADKSTLNHMLSTFKDPQDPLWLALFPEGTDFTEQKCLRSQKYAAEHGLPILTTVLLPKTKGFCTCIQELRGSLDAVYDVTIGYKYRCPSFLDNVFGLAPAEVHIHICRFLYDSIPVSEDEMSNWLVERFRYKDHLLSIFQAQGQFPDQATERDLSAGKSILNCVVVIMLTTTCMYYTFSSAWFKLYVSLVCAYLVPATYFNIRPQPILGVLKK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0250 372 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 34 243 - -
Lan13g0250 372 SMART plsc_2 100 222 IPR002123 GO:0016746
Lan13g0250 372 CDD LPLAT_LCLAT1-like 76 265 - -
Lan13g0250 372 Pfam Acyltransferase C-terminus 255 320 IPR032098 -
Lan13g0250 372 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5-RELATED 1 371 - -
Lan13g0250 372 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 371 - -
Lan13g0250 372 Pfam Acyltransferase 89 243 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0250 Lan-Chr13 1577476 1581085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0250 14 365 Miscellaneous Gene Families AT1G75020 61.473 2.45e-158 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0250 K13513 - gmx:100814885 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0250 13 1577476 1581085 Lan13g0250 13 1577476 1581085 ECH