Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0247 ATGTCGAAGCTAATCTTGTGTGTGTTCCTAACCTTCACCCTTATTCCACTGCTATGCACCTCTTTCTCTTCCGATACACCCTCAGATCGACGCGTTCTCGTTTTGCTCGATGACTTTGCTCTCAAATCCTCTCATTCTCTCTACTTCAATTCCCTTCATTCTCGCGGCTTCGATCTCGAGTTCAAACTCGCTGATGATCCCAAAATCGCGCTCCAGAGATACGGCCAGTACCTCTACGATGCCCTAATTCTCCTTTGTCCAACCATCGAACGATTTGGAGGTTCTATTGATGCTGCTGCTATTTTGGATTTTGTTGATTCCGGTCATGATTTGATAGTTGCTGCTGACAGCAATGCATCTGATTTGATCAGAGAAATTGCCACTGAGAGTGGAGTGGACTTTGATGAGGATCCTGCTGCTTTGGTTGTAGACCATTCTGGTTATGCAGTCTCTGCCTCTGAAGGGGATCATACTTTGATTGCTAGTGATGATTTAATCAAGTCTGATGTGATTTTGGGAAGCAAAAAAATTGAGGCTCCAGTACTTTTCCAAGGGATTGGGCATTCATTAAATCCTTCCAATAGTCTGGTCTTGAAAGTTCTCTCTGCATCTCCTTCAGCATATTCTGCTAATCCAAAATCTAAGTTGGCATCTCCTCCATCACTCACTGGATCTACAATCTCATTGGTTTCAGTTATACAGGCAAGAAATAATGCTCGGATATTGATCTCTGGCTCATTGAGCCTGTTCAGCAACCGATTTTTCAGGTCTAGTGTTCAGAAGGCTGGGAGTCCAATCAAGCATGACAAGTCTGGTAACGAGCAGTTCTTGACTGAAGTCAGCAAATGGGTTTTCCATGAAAGAGGTCACCTCAAGGCGGTGAATGTGCAACACCATAAAATTGGGGAAGCTGACGAACCAGCCATGTATAGGATCAACGATGATTTGGAATACTCTGTTGAAATTTATGAGTGGTCTGGGACAGCTTGGGAACCTTATGTGGCTGATGATGTTCAAGTGCAATTTTACATGATGAGCCCCTATGTCTTGAAGACTTTATCAACTGATGGAAAGGGTCGTTACTTCACATCCTTTAAGGTTCCTGATGTCTATGGGGTTTTCCAATTCAAAGTTGAGTACCATAAACTTGGATATTCGACCTTATCTTTATCAAAGCAGATTCCTGTCCGTCCCTTCAGACACAATGAATACGAGAGATTTATTCCAGCAGCTTATCCCTATTATGGAGCAGCATTTTCAATGATGGCAGGTTTCTTCATCTTCACTGCTGTTCATCTATACAACAAGTAG 1311 0.4294 MSKLILCVFLTFTLIPLLCTSFSSDTPSDRRVLVLLDDFALKSSHSLYFNSLHSRGFDLEFKLADDPKIALQRYGQYLYDALILLCPTIERFGGSIDAAAILDFVDSGHDLIVAADSNASDLIREIATESGVDFDEDPAALVVDHSGYAVSASEGDHTLIASDDLIKSDVILGSKKIEAPVLFQGIGHSLNPSNSLVLKVLSASPSAYSANPKSKLASPPSLTGSTISLVSVIQARNNARILISGSLSLFSNRFFRSSVQKAGSPIKHDKSGNEQFLTEVSKWVFHERGHLKAVNVQHHKIGEADEPAMYRINDDLEYSVEIYEWSGTAWEPYVADDVQVQFYMMSPYVLKTLSTDGKGRYFTSFKVPDVYGVFQFKVEYHKLGYSTLSLSKQIPVRPFRHNEYERFIPAAYPYYGAAFSMMAGFFIFTAVHLYNK* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0247 436 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT 6 436 IPR005013 GO:0005789|GO:0018279
Lan13g0247 436 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT 6 436 - -
Lan13g0247 436 Pfam Oligosaccharyltransferase 48 kDa subunit beta 31 436 IPR005013 GO:0005789|GO:0018279
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0247 Lan-Chr13 1559668 1564653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0247 K12670 - gmx:100803270 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0247 13 1559668 1564653 Lan13g0247 13 1559668 1564653 ECH
Lan7g0163 7 995827 1000311 Lan13g0247 13 1559668 1564653 LSH