Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0246 ATGGATATTCAACTCAACCAAGTCAAGATGAGTGATGGAAAAGCACTTGAAGGAAAAGCTGATGAGAAAATTGTTGAGGATTTTAATCCTCAAAAGAAGAAGCCCAAAAGGAACAAGTATGCTTTTGCTTGTGCTATATTGGCTTCCATGACTTCCATCTTACTTGGCTATGATATTGGTGTAATGAGTGGAGCAGCCATATACATAAAAAGAGACCTCAAAGTCACCGACGTGCAAATTGAAATCCTTCTTGGAATCATAAACCTATACTCTCTAATAGGCTCTGGCCTCGCCGGAAGAACCTCTGATTGGATTGGTCGGCGTTACACAATTGTCCTCGCCGGTGCCATTTTCTTTGCCGGAGCCATACTCATGGGTTTCTCTCCAAACTATTCCTTTCTCATGTTTGGTCGTTTCGTCGCCGGCATTGGCATCGGTTATGCTCTCATGATTGCCCCGGTCTACACCGCCGAGGTCTCCCCTGCTTCTTCTCGTGGTTTTCTCACCTCCTTCCCCGAGGTTTTCATCAACGGAGGGATATTACTAGGATACATCTCAAACTTTGCATTTTCAAAGCTGACACTTAAGGTAGGTTGGAGACTAATGCTTGGAATCGGAGCAGTTCCTTCGGTACTTCTAGCCGTTGGAGTATTAGCAATGCCTGAATCACCACGATGGCTTGTAATGCGAGGTCGTTTAGGTGATGCAATAAATGTTCTCAACAAAACCTCTGATTCCAAAGAAGAAGCTCAACTAAGATTAGCTGAAATTAAACAAGCTGCAGGAATCCCTGAATCTTGCAACGACGATGTCGTTGAAGTACCAAAACAAAACACTGGTGAAGGTGTTTGGAAACAACTTTTCGTTTATCCTACACCAGCAATTCGTCATATTGTAATAGCTGCTCTCGGAATTCACTTTTTCCAACAAGCTTCTGGCGTAGACGCTGTCGTTTTATATAGCCCTACAATATTTGAAAAAGCTGGAATCACAAACGACACTGATAAGCTTCTCGCAACCGTGGCCGTTGGATTTACCAAAATGATTTTCATCTTAGTAGCCACGTTTACGTTAGACCGTGTCGGGCGTCGTCCATTGTTGTTATCCAGTGTCGGTGGAATGGTGTTGTCGCTTCTCACACTTGCTACCAGCCTCACGATCATTGACCAATCAGAGAAGAAGTTAACATGGGCCGTTGGATTAAGCATTGCGACGGTTTTGTCATACGTGGCTACTTTTTCAATCGGTGCGGGACCCATAACGTGGGTTTATAGTTCAGAGATATTTCCGTTGAGGTTACGAGCACAAGGGTGTGCAATGGGGGTAGTGGTGAATAGAGTAACGAGTGGAGTAATATCAATGACTTTTCTGTCCTTATCTAAAGGGATAACTATTGGTGGAGCATTTTTTCTTTATGGAGGGATTGCTATTGCTGGATGGATATTCTTCTATTTCATGTTGCCTGAGACACAAGGGAAAACACTTGAAGAGATGGAAGGATCTTTTGGTCAATTTAAGGATAAGTTTGATAAGAATAAGGAACTTGATCATGTCCAATTAGGGACCAATGTTCGAACTTAG 1581 0.4307 MDIQLNQVKMSDGKALEGKADEKIVEDFNPQKKKPKRNKYAFACAILASMTSILLGYDIGVMSGAAIYIKRDLKVTDVQIEILLGIINLYSLIGSGLAGRTSDWIGRRYTIVLAGAIFFAGAILMGFSPNYSFLMFGRFVAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNFAFSKLTLKVGWRLMLGIGAVPSVLLAVGVLAMPESPRWLVMRGRLGDAINVLNKTSDSKEEAQLRLAEIKQAAGIPESCNDDVVEVPKQNTGEGVWKQLFVYPTPAIRHIVIAALGIHFFQQASGVDAVVLYSPTIFEKAGITNDTDKLLATVAVGFTKMIFILVATFTLDRVGRRPLLLSSVGGMVLSLLTLATSLTIIDQSEKKLTWAVGLSIATVLSYVATFSIGAGPITWVYSSEIFPLRLRAQGCAMGVVVNRVTSGVISMTFLSLSKGITIGGAFFLYGGIAIAGWIFFYFMLPETQGKTLEEMEGSFGQFKDKFDKNKELDHVQLGTNVRT* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0246 526 Coils Coil 240 260 - -
Lan13g0246 526 PRINTS Sugar transporter signature 52 62 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan13g0246 526 PRINTS Sugar transporter signature 135 154 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan13g0246 526 PRINTS Sugar transporter signature 309 319 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan13g0246 526 PRINTS Sugar transporter signature 403 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan13g0246 526 PRINTS Sugar transporter signature 426 438 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan13g0246 526 ProSitePatterns Sugar transport proteins signature 2. 140 165 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan13g0246 526 Gene3D MFS general substrate transporter like domains 34 505 IPR036259 -
Lan13g0246 526 TIGRFAM SP: MFS transporter, sugar porter (SP) family 25 498 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lan13g0246 526 Pfam Sugar (and other) transporter 44 500 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lan13g0246 526 SUPERFAMILY MFS general substrate transporter 26 499 IPR036259 -
Lan13g0246 526 ProSitePatterns Sugar transport proteins signature 1. 98 115 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan13g0246 526 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 26 517 IPR045262 GO:0015144
Lan13g0246 526 ProSiteProfiles Major facilitator superfamily (MFS) profile. 44 491 IPR020846 GO:0022857
Lan13g0246 526 PANTHER SUGAR TRANSPORTER 26 517 - -
Lan13g0246 526 CDD MFS_PLT 47 498 IPR044776 GO:0005351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0246 Lan-Chr13 1534067 1537103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0246 33 513 Organic Solute Cotransporters AT3G18830 76.141 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0246 - - lja:Lj3g3v3338420.1 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0246 13 1534067 1537103 Lan13g0246 13 1534067 1537103 ECH
Lan7g0160 7 975647 978923 Lan13g0246 13 1534067 1537103 LSH