Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0235 ATGAGTTCCGATTCCAACGGTGTTCAGATCCACAACACACGGAGGCTACCAGATTTCCTCCAAAGTGTGAATCTCAAGTACGTGAAACTTGGCTACCATTACCTCATTACCTATCTCTTTACCCTTACCTTGATCCCTATCATGGTACTTATCACTATCCATGTTACTCAGATGAACCTTGACGACGTTCATGCCCTTTGGCTCCAACTCAAGTACAACCTCGTCAGCATCCTCGTATGTTGCGTTATACTTGTTTCTGGATCCGTTATTTTCTTCATGACCAGACCAAGACCCATTTACCTCATTGACTTTTCATGTTACCGTCCACCTTCTCGTCTCGCTGTCCAATCTCACCAGTTCATGGAACATTCTAGACTCACTGGTTACTTCGACGAATCCTCGCTCGAGTTCCAGCGCAAGATTCTAGAACGTTCTGGACTTGGAGAAGAGACCTATGTCCCTGATGCAATGCATCATCTCCCACCAACTCCTTCAATGGCTGCGGCTAGAGAAGAAGCTGAGCAAGTCATGTATGGTGCACTTGATAACCTTTTTGCCAACACTAACGTTAAACCCAAAGATATTGGTATCCTTGTTGTGAATTGCAGCTTGTTTAACCCTACTCCTTCGCTTTCAGCTATGATTGTGAACAAGTATAAGTTGAGGGGTAATATAAGGAGCTATAATCTTGGGGGTATGGGTTGTAGTGCTGGTGTTATAGCAATTGATCTTGCTAAGGATTTGCTTCAGGTTCATAGGAAGACCTATGCAGTTGTGGTTAGTACTGAGAACATTACTCAGAATTGGTACTTTGGGAATAAGAAGTCTATGCTGATACCTAATTGCTTGTTTCGTGTTGGTGGCGCTGCCATTTTACTATCCAACATTGCCTCTGATAGGAGGAGATCCAAGTATGAGCTTTTTCGTGCTGTGAGGACTCATAAAGGTGCTGATGATAAGGCTTTTGAATGTGTTTATCAGGAACAAGATGATGCTGGGAAAACTGGTGTTTCATTGTCCAAGGATCTCATGGCTATTGCTGGTTTGATTACTAAGAAGCTGTTTAATGCCTATAAGAAGACTTATATACCAGATTTCAAGCTTGCTTTTGACCATTTCTGCATACATGCTGGTGGGAGAGCTGTGATTGATGAACTTGAGAAGAATCTGGAGCTTGAGCCAAAGCATGTTGAGGCATCTAGGATGACTCTGCATAGGTTTGGAAACACTTCCTCTAGTTCAATTTGGTATGAGTTGGCTTACATTGAAGCAAAGGGAAAGATGAAGAAGGGTAATAGGGTATGGCAGATTGCATTTGGAAGTGGATTTAAGTGTAACAGTGCAGTGTGGAAGGCCCTCAGGAATGTCAAGCCTTCACCAAATAGTCCATGGGAAGATTGCATTATGAACTACCCAGTCATGATTCATGCATAG 1434 0.4289 MSSDSNGVQIHNTRRLPDFLQSVNLKYVKLGYHYLITYLFTLTLIPIMVLITIHVTQMNLDDVHALWLQLKYNLVSILVCCVILVSGSVIFFMTRPRPIYLIDFSCYRPPSRLAVQSHQFMEHSRLTGYFDESSLEFQRKILERSGLGEETYVPDAMHHLPPTPSMAAAREEAEQVMYGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSYNLGGMGCSAGVIAIDLAKDLLQVHRKTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGAAILLSNIASDRRRSKYELFRAVRTHKGADDKAFECVYQEQDDAGKTGVSLSKDLMAIAGLITKKLFNAYKKTYIPDFKLAFDHFCIHAGGRAVIDELEKNLELEPKHVEASRMTLHRFGNTSSSSIWYELAYIEAKGKMKKGNRVWQIAFGSGFKCNSAVWKALRNVKPSPNSPWEDCIMNYPVMIHA* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0235 477 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 370 451 IPR013747 -
Lan13g0235 477 PIRSF Very_long_ch_3-ktacl-CoA_syn 18 355 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lan13g0235 477 PIRSF Very_long_ch_3-ktacl-CoA_syn 348 477 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lan13g0235 477 PANTHER 3-KETOACYL-COA SYNTHASE 4 9 348 - -
Lan13g0235 477 PANTHER 3-KETOACYL-COA SYNTHASE 4 348 476 - -
Lan13g0235 477 PANTHER 3-KETOACYL-COA SYNTHASE 9 348 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lan13g0235 477 PANTHER 3-KETOACYL-COA SYNTHASE 348 476 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lan13g0235 477 Gene3D - 110 452 IPR016039 GO:0016746
Lan13g0235 477 SUPERFAMILY Thiolase-like 307 453 IPR016039 GO:0016746
Lan13g0235 477 Pfam FAE1/Type III polyketide synthase-like protein 92 353 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lan13g0235 477 SUPERFAMILY Thiolase-like 87 302 IPR016039 GO:0016746
Lan13g0235 477 CDD CHS_like 84 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0235 Lan-Chr13 1457505 1459352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0235 9 475 Miscellaneous Gene Families AT1G19440 75.862 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0235 K15397 - jre:109019693 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0235 13 1457505 1459352 Lan13g0235 13 1457505 1459352 ECH