Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0231 ATGGGTAAAGCGAAGGGGAAGCATCGTTTAGACAAGTACTATCACTTAGCGAAGGAACATGGTTACAGATCCAGAGCTTCATGGAAACTTGTTCAACTCAATTCCAAGTTCCGCTTCCTCGAATCCTCTCACGCCGTTCTCGATCTCTGCGCCGCTCCCGGTGGTTGGATGCAAGTCGCCGTCCAGCGTGTTCCCGTCGATCACCTTGTCATCGGCGTTGATCTTGCTCCGATTGCTCCTATCCGCGGCGCCGTCGCGATACAGGAAGATATTACTCGGACTGAGTGTAAGGCGAAGATTAAGAAGCTGATGAACCAGCATGGTTGCAATGCGTTTGATGTGATATTGCATGATGGTTCGCCTAATATTGGTGGTGCTTGGGCTCAAGAAGCTATGAGCCAGAACGCTCTTGTTATTGATGCTGTTAAGTTGGCTACTCAGTTTTTAGCCCCTAAGGGCATTTTCGTCACTAAGGTTTTCAGGTCGCAAGATTACAGTTCTGTAGTCTATTGTTTAAAGCAGCTGTTTGAGAAGGTTGAGGTGGATAAGCCAGCAGCTAGTCGTTCCGAATCTGCAGAAATATATGTTTTGGGCCTGAAGTACAAGGCCCCGGCTAAGATTGATCCACGACTTCTTGATTTCAAGCATCTCTTTCAGGGATCAGCTGAGCCCCAATCGAAGGTTGTGGATGTACTTAGAGATAATAAACAGAAGAGACATCGTGATGGTTATGAAGATGGAAACACGACTTTAAGGAAGATGTCTTCAGCTGCGAATTTCATTTGGTCTGATTCTCCTCTGGAGATCCTTGGTTCAGTCACCTCCATAACCTTTACCGATCCTGCTGATTTACAAATCAAGGATAACATGTTAACAACTGAAGAGGTAAAATCTCTCTGTGATGATTTGAGGGTTTTGGGTAAGCAGGACTTCAAGCATCTTCTGAAGTGGCGGATTAACATTAGAAAAGCTCTTTCTCCTACTCAAAAGCCCGATCCTACTGCTAAAGTTGAGACCGAAGATGAGCCTAAGGTAGATGAAGATGATAGAATACTCAATGAAATGGAGGAGCTGACAAATGCAATGGACCGCAATAAGAAGCGTGCAAAGAAGCTTCTTGCGAAAAGAAGAGCTAAGGACAAAGCTCGAAAAGCAACAGGGATGCAAATGGACGTAGTAGAAGATGGTTATGTTGATCATGAGTTGTTTTCTCTTTCCGCTATCAAGGGTAAGAATGATCTTGCAGCTGTTGATACCACTGAATATGAAGGTGATGAGAGGGAAGTGTATGACAGTGATAATGAAAATATCCATGAAGGATCAGAGCATTCATCCAGTGGCTTGGAGGATTCTGATCAAGAGCGTAAAAGGTATGATGAACAAATGGATGAGTTTCTTGAAGGAGCTTATGAGCGGTTTGTGGTAAAAAAGGAAGGAACTGCAAAGCAGAGGAAGCGTGTTAAGAAGTCATATGATGCAGGGAAAGAACTTTTGGAGGGTGGTGAGGATGATGGTATTGTTCAGCCCAAATATGATTCAGATGAAGATCAGCCTGTTCAAGAAGCAAATCCTTTAGTGGTGCCACTTAATGATGGTACAGGGCCCACCCAAGAGGAGATCACAAATAGGTGGTTTAGTCAGGATGTTTTTGCTGAAGCTGCAGAGGAAGGAGACTTTGAGAAACACGAGAGTGAAGATGAAATGGATATAGATGGGCACAAGGATAAGAAGTCAACGACAGTAATCAAGGAGAAGAAATCCATTCTGAAAAAAGCCAAAGAAAATAAAACAGAAGCTCCTGCAGCTGTGGTGATAGACAAACCCCAATCTCAAGCATCTAAGGCAGACGACGATTTTGAGATAGTTCCTGCGCCTGGTACTGATTCTAGTGATTCATCCTCTGAATCAGAGGATGATGATATTGAAACCAAAGCTGAGATATTGGCTTGTGCTAGGAAGATGCTGAGGAAAAAGCAACGGGAACTGGTACTTGATGATGCATATAACAAGTACATGTTTGATGACGAGGGATTGCCTAAGTGGTTTATAGATGAGGAAAAGAAGCACCGCGTACCAGTGAAGCCAGTTACCAAAGAGGAAATTGCTGCAATGAGAGCACAATTTAAAGAAATTGATGCTCGGCCTGCGAAGAAGGTGGCAGAGGCCAAAGCAAGAAAGAAACGTGTGGCGATGAGGAAGCTTGAGAAGGCACGTAAGAAGGCGACTGCCATATCTGATCAGACAGAGATATCTGATCGTTCGAAGAGCAAGCAAATAGAAAAACTGTATAAAAAGGCTACTGCTCAACAGAGGCCTAAAAAGGAATATGTGGTTGCAAAGAAAGGTGTCCAAGTTAAGACTGGGAAGGGAAAAGTCCTTGTAGATCGGAGAATGAAGAAGGATGCTAGGACACGTGGAATGGGTAAATCAGGAAAAGGGGGTCCCAAGACTAAGGGCAAGGGTAGGGGTGGCAAGGCTTCCAAGGGAAAAGTACCTTCAAAGGGCTCAGCCAAGAAGGGCGGAAGAAAGGGGAATAAATGA 2541 0.4435 MGKAKGKHRLDKYYHLAKEHGYRSRASWKLVQLNSKFRFLESSHAVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLAPIAPIRGAVAIQEDITRTECKAKIKKLMNQHGCNAFDVILHDGSPNIGGAWAQEAMSQNALVIDAVKLATQFLAPKGIFVTKVFRSQDYSSVVYCLKQLFEKVEVDKPAASRSESAEIYVLGLKYKAPAKIDPRLLDFKHLFQGSAEPQSKVVDVLRDNKQKRHRDGYEDGNTTLRKMSSAANFIWSDSPLEILGSVTSITFTDPADLQIKDNMLTTEEVKSLCDDLRVLGKQDFKHLLKWRINIRKALSPTQKPDPTAKVETEDEPKVDEDDRILNEMEELTNAMDRNKKRAKKLLAKRRAKDKARKATGMQMDVVEDGYVDHELFSLSAIKGKNDLAAVDTTEYEGDEREVYDSDNENIHEGSEHSSSGLEDSDQERKRYDEQMDEFLEGAYERFVVKKEGTAKQRKRVKKSYDAGKELLEGGEDDGIVQPKYDSDEDQPVQEANPLVVPLNDGTGPTQEEITNRWFSQDVFAEAAEEGDFEKHESEDEMDIDGHKDKKSTTVIKEKKSILKKAKENKTEAPAAVVIDKPQSQASKADDDFEIVPAPGTDSSDSSSESEDDDIETKAEILACARKMLRKKQRELVLDDAYNKYMFDDEGLPKWFIDEEKKHRVPVKPVTKEEIAAMRAQFKEIDARPAKKVAEAKARKKRVAMRKLEKARKKATAISDQTEISDRSKSKQIEKLYKKATAQQRPKKEYVVAKKGVQVKTGKGKVLVDRRMKKDARTRGMGKSGKGGPKTKGKGRGGKASKGKVPSKGSAKKGGRKGNK* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0231 846 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 202 IPR029063 -
Lan13g0231 846 Coils Coil 352 375 - -
Lan13g0231 846 MobiDBLite consensus disorder prediction 790 807 - -
Lan13g0231 846 MobiDBLite consensus disorder prediction 479 518 - -
Lan13g0231 846 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 812 IPR028589 GO:0008649|GO:0031167
Lan13g0231 846 Pfam Spb1 C-terminal domain 613 805 IPR012920 GO:0005634|GO:0006364|GO:0008168
Lan13g0231 846 Pfam FtsJ-like methyltransferase 22 200 IPR002877 GO:0008168|GO:0032259
Lan13g0231 846 MobiDBLite consensus disorder prediction 590 642 - -
Lan13g0231 846 Pfam Domain of unknown function (DUF3381) 235 383 IPR024576 -
Lan13g0231 846 MobiDBLite consensus disorder prediction 555 578 - -
Lan13g0231 846 Coils Coil 717 740 - -
Lan13g0231 846 MobiDBLite consensus disorder prediction 730 846 - -
Lan13g0231 846 MobiDBLite consensus disorder prediction 326 346 - -
Lan13g0231 846 MobiDBLite consensus disorder prediction 421 462 - -
Lan13g0231 846 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 1 813 - -
Lan13g0231 846 MobiDBLite consensus disorder prediction 736 780 - -
Lan13g0231 846 MobiDBLite consensus disorder prediction 479 517 - -
Lan13g0231 846 Gene3D Vaccinia Virus protein VP39 19 208 IPR029063 -
Lan13g0231 846 MobiDBLite consensus disorder prediction 431 462 - -
Lan13g0231 846 PANTHER RRNA METHYLTRANSFERASE-RELATED 1 813 - -
Lan13g0231 846 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 6 202 IPR015507 GO:0001510|GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0231 K14857 - gmx:100790741 1223.38