Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0209 ATGGCCTCGTTCTCAAGAGCAAGGAGCAGCTCGCCATTTTCGAACTACAAATCTTCAACTCCATACTCTTCTGCTTCTTCATCTTCTTCCTTCATGAACGGACGGTTACTTCCTCGCGCCTCTTCCTCTTCTTCGTCGTCGTTTATCAACTCCGGTGGCCGATCTGTCACCTTGAGTCGCGGTCGTGCTCGCAGCGAGTCAAACTACTCCGATTACGGTGATAGTACTTCACCGTTGGAGTTCGGGATGGAGGAGGTGATTGCGGAGCCTCTTGATTCATCGATTTCTCAGGATAGTATTTCGGTCACGATTCGGTTCAGACCTTTGAGTGATAGGGAGTATCAGAGAGGGGATGAGATCGCGTGGTATGCGGATGGTGATAAGATTGTGAGAAACGAGCATAATCCAGTTACTGCTTATGCATACGATAGAGTGTTTGGACCACATACGAATACGGAAGAGGTGTATGAAGTAGCAGCAAAACCTGTAGTGAAGGCTGCCATGGAAGGAGTTAATGGAACTGTATTTGCCTATGGTGTGACAAGTAGTGGTAAGACACATACTATGCATGGAGACCAAGATTGTCCTGGTGTCATTCAATTGGCTATAAAAGATGTTTTCAGCATTATCCAAGATACTCCAGGAAGAGAGTTCTTACTCAGAGTCTCATATCTTGAAATATACAATGAGGTGATAAATGACTTGCTTGACCCAACTGGTCAAAATTTGCGTGTTAGAGAAGATGCACAGGGTACTTATGTAGAGGGTATGAAGGAAGAAGTTGTTTTATCTCCTGGACATGCACTTTCATTTATTGCTGCTGGAGAAGAGCATCGTCATGTTGGATCAAACAATTTTAATCTCTTCAGCAGCCGAAGTCACACCATTTTCACACTTATGATTGAAAGCAGTGCCCATGGCGATGATTATGATGGAGTGATCTTCTCTCAGCTTAACTTGATCGATCTGGCTGGATCTGAAAGCTCAAAAACTGAAACAACTGGATTAAGAAGAAAAGAAGGATCTTACATAAACAAAAGTCTTCTAACTCTTGGAACTGTTATAGGAAAATTGAGCGAGGGGAAATCATCTCATGTTCCATACCGAGACTCAAAGCTTACACGCCTCCTGCAGACTTCACTCAGTGGGCATGGCCATGTTTCTCTTATATGCACAGTAACTCCAGCATCCAGTAATATGGAGGAAACTCATAATACCTTGAAGTTTGCTAGCAGAGCAAAGAGAGTAGAAATATATGCTTCATGTAATAAGATTATTGACGAAAAGTCTCTAATTAAGAAATACCAGAGAGAAATTTCAGCCCTCAAACAAGAACTTGATCATCTTAAGAAGGGAATGCTAGTTGGTGTTAGCCATGAGGAGATCATGAGCTTAAAGCAAAAGTTGGAAGAAGGTCAGGTGAAAATGCGATCAAGATTGGAAGAAGAGGAAGATGCAAAGGTTGCTCTTATGAGTAGGATCCAGAGGCTAACCAAGCTTATTCTGGTTTCTTCAAAGAATGCAATTCCTGGATATCTAACTGATGCTCCCAGCCACCAGCGAAGTCACTCTGTTGGTGAGGATGATAAATATGATGCCTTCCGTGACGTGTCTCTTTTTATCGAAAGTGGAAGTCAAAAAGATGTTTCCACATTGTCATCTGATCTGTCTCTTGACGTTAGACATAGAAGATCATCAAGTAGAAGGAATGATGAACTCTCCCCAACTAGCAGTATTATTACCAAATCAACACAAGCTGGTGAACTGATCAGCAGAACAAGGCTACCAGTGGGAGGGATTACAATGTCCGATCAGATGGATCTTCTTGTAGAGCAAGTCAAAATGCTTGCAGAAGATATTGCTTTCAGTACTAGCACTCTGAAGCGCTTGATGGAACAGTCTGCAAATGATAATGGAAGCTCCAAAACTCAGATTGAGAATTTGGAACAAGACATCCAAGAAAAAAGGAAGCAAATGAGAGTTTTAGAACAAAGAATAAGTGAGTGTGGTGAATCTTCTATCGCAAACTCATCACTGGTTGAAATGCAGCAGACAGTCGAAAGGTTAATGTCTCAGTGCAATGAGAAGGCGTTTGAGCTGGAAATAAAATCTGCAGACAACCGTGTCCTTCAAGAACAGTTAAATGATAAGTGTTCTGAAAACAGCGAATTGCATGAAAAAGTGATGCTGCTAGAGCACCAACTAGCAACAGTTTCAAGTGGTACCTCATTAGTGCTTGATGATCATCGTCTATATGATGAACATGTTGATGAGTTGAAAAGGAAAATACAATCCCAGGAGATTGAAAATGAAAACCTGAAGCTAGAACAAGTTCAGTTATCAGAAGAGAATAGTGGGTTGCACGTGCAGAATCAGAAACTCTCTGAAGAAGCTTCTTATGCCAAAGAACTGGCCTCTGCTGCTGCTATGGAACTGAAGAATTTAGCTGCGGAAGTGACAAAACTTTCATTGCAGAATGCAAAATTGGAAAAAGAATTGATGGCTGCTCGAGATCTGGTCAACACTCGAAGTGCTCTCATACAAACAGTTAATGGTGTTAACCGCAAGTATGATATAAGATCTGGGAGGAAGGGGGGAACTTCTTGCCGTGCTAATGAAATTTCAGGAGCTGGTCTAGATGAGTTTGAGTCATGGAGTCAGGCTGATGATCTGAGAATAGAACTTCAGGCTAGGAAACAACGAGAGGAAGCTCTTGAGGCTGCATTAGCTGAAAAGGAATTTGTGGAAGAGGAGTACAGGAAAAAGGTTGAAGAGGCAAAGAAAAGAGAAGCCGCCTTGGAGAATGATTTAGCAGGCATGTGGGTTCTTGTTGCAAAGTTAAAGAAAGAAGTGGGCACTGTCCCAGAAGTGAACATTGATAAGAAAAATGGTGGTGGGGAGGCAAATACCGATGGTTTGAAAAGTAAAGACATTGGAGGTAATACTGTCCCGAAGGAGCAAATTTTGGATGTATCAAAATCAGACAATGAAGTTCCCAAGGAAGAACCCTTGGTTGCTCGTCTTAAGGCACGCATACAAGAGATGAAGGAAAAAGAGCTCAAGCACCTAGGCAATGGAGATGCTAATTCACATGTTTGTAAAGTATGTTTTGAATCATCAACTGCGGCAATTCTTCTTCCATGCCGTCATTTTTGTTTGTGTAAATCTTGTTCACTTGCTTGTTCTGAATGTCCAGTATGCCGGACAAATATTGCAGATAGACTTTTTACTTTTACATCTTGA 3243 0.4181 MASFSRARSSSPFSNYKSSTPYSSASSSSSFMNGRLLPRASSSSSSSFINSGGRSVTLSRGRARSESNYSDYGDSTSPLEFGMEEVIAEPLDSSISQDSISVTIRFRPLSDREYQRGDEIAWYADGDKIVRNEHNPVTAYAYDRVFGPHTNTEEVYEVAAKPVVKAAMEGVNGTVFAYGVTSSGKTHTMHGDQDCPGVIQLAIKDVFSIIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGMKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSAHGDDYDGVIFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKSSHVPYRDSKLTRLLQTSLSGHGHVSLICTVTPASSNMEETHNTLKFASRAKRVEIYASCNKIIDEKSLIKKYQREISALKQELDHLKKGMLVGVSHEEIMSLKQKLEEGQVKMRSRLEEEEDAKVALMSRIQRLTKLILVSSKNAIPGYLTDAPSHQRSHSVGEDDKYDAFRDVSLFIESGSQKDVSTLSSDLSLDVRHRRSSSRRNDELSPTSSIITKSTQAGELISRTRLPVGGITMSDQMDLLVEQVKMLAEDIAFSTSTLKRLMEQSANDNGSSKTQIENLEQDIQEKRKQMRVLEQRISECGESSIANSSLVEMQQTVERLMSQCNEKAFELEIKSADNRVLQEQLNDKCSENSELHEKVMLLEHQLATVSSGTSLVLDDHRLYDEHVDELKRKIQSQEIENENLKLEQVQLSEENSGLHVQNQKLSEEASYAKELASAAAMELKNLAAEVTKLSLQNAKLEKELMAARDLVNTRSALIQTVNGVNRKYDIRSGRKGGTSCRANEISGAGLDEFESWSQADDLRIELQARKQREEALEAALAEKEFVEEEYRKKVEEAKKREAALENDLAGMWVLVAKLKKEVGTVPEVNIDKKNGGGEANTDGLKSKDIGGNTVPKEQILDVSKSDNEVPKEEPLVARLKARIQEMKEKELKHLGNGDANSHVCKVCFESSTAAILLPCRHFCLCKSCSLACSECPVCRTNIADRLFTFTS* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0209 1080 Coils Coil 466 500 - -
Lan13g0209 1080 PANTHER CENTROMERE PROTEIN E 59 1041 - -
Lan13g0209 1080 MobiDBLite consensus disorder prediction 559 580 - -
Lan13g0209 1080 Pfam Zinc finger, C3HC4 type (RING finger) 1031 1072 - -
Lan13g0209 1080 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1006 1078 IPR013083 -
Lan13g0209 1080 Coils Coil 812 839 - -
Lan13g0209 1080 Coils Coil 888 936 - -
Lan13g0209 1080 ProSitePatterns Kinesin motor domain signature. 316 327 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan13g0209 1080 MobiDBLite consensus disorder prediction 1 75 - -
Lan13g0209 1080 Coils Coil 631 672 - -
Lan13g0209 1080 ProSiteProfiles Zinc finger RING-type profile. 1033 1068 IPR001841 -
Lan13g0209 1080 ProSiteProfiles Kinesin motor domain profile. 99 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan13g0209 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 451 IPR027417 -
Lan13g0209 1080 SMART kinesin_4 97 424 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan13g0209 1080 Coils Coil 425 452 - -
Lan13g0209 1080 Gene3D Kinesin motor domain 91 447 IPR036961 -
Lan13g0209 1080 SUPERFAMILY RING/U-box 1032 1072 - -
Lan13g0209 1080 CDD KISc_CENP_E 102 416 - -
Lan13g0209 1080 Coils Coil 749 783 - -
Lan13g0209 1080 Pfam Kinesin motor domain 105 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan13g0209 1080 MobiDBLite consensus disorder prediction 1 76 - -
Lan13g0209 1080 PRINTS Kinesin heavy chain signature 170 191 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan13g0209 1080 PRINTS Kinesin heavy chain signature 284 301 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan13g0209 1080 PRINTS Kinesin heavy chain signature 317 335 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan13g0209 1080 PRINTS Kinesin heavy chain signature 366 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan13g0209 1080 PANTHER KINESIN-LIKE PROTEIN KIN-7D, MITOCHONDRIAL 59 1041 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0209 Lan-Chr13 1303813 1315177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0209 35 1080 Miscellaneous Gene Families AT4G39050 70.444 0.0 1441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0209 K11498 - gmx:100800460 1617.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0209 13 1303813 1315177 Lan13g0209 13 1303813 1315177 ECH
Lan7g0129 7 775492 785640 Lan13g0209 13 1303813 1315177 LSH