Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0205 ATGGCACTAAATCTCACTTTATCTCCTTCTTCCCTTTCAACATTTCCAAACCATCACTTACGTCGTCGTTTCCTTCTACAGAACGCTACTCTTACACCAAATCTGCGCCTCACACCCTCGAAACACCGTTTAGTAATTTCACGCGTAGCAGGAGGACATGAACTCACCACTGATTCTGATAACAATGACCGAAATCATCGAATCAACATAGATGAAAACACCGGAAACGAGAGCGAGAAGAAGGAACTAACAGAACAGAGTATATGGAATCAGATGAAGGAAATTGTAATGTTTACTGGACCAGCAACTGGACTTTGGATCTGTGGACCGTTAATGAGTCTCATTGATACTGCAGTTATTGGTCAAGGAAGCTCTATTCAACTTGCTGCTTTAGGTCCTGCTACGGTTGTTTGTGATTACATGAGCTACGTTTTCATGTTTCTATCAGTTGCTACTTCCAATATGGTTGCTACTGCCATTGCTAAAGAGGATAGAGAAGAGGTGCAGCATCACATATCTGTCTTGCTTTTTGTTGGGTTAGCATGTGGCATCGTGATGCTTTTGTTCACAAGGTTATATGGTGCAGCAACACTCACTGCTTTCGCTGGGGCAAAGAATGTTCATGTTGTACCTGCAGCTAATACATATGTTCAGATTCGAGGCTTGGCATGGCCTGCTTTACTTATTGGATGGGTTGCTCAAAGTGCAAGTCTTGGTATGAAAGATTCCTGGGGTCCCTTGAAGGCTTTGGCTGTTGCCAGTGTTATAAATCTAATCGGCGATATACTTCTATGCACCTACTTAGGATATGGTATTGCAGGGGCTGCATGGGCTACCATGGCATCACAAGTTGTTGCTGCTTATATGATGATTCAAAATCTAAACAATAAGGGATATAATGCATATGCCTTCTCTGTTCCTTCAGGGGAGGAATTTTTTACGATACTTGCTCTTGCCGCTCCTGTATTTTTGACGATGATGTCAAAGGTGGCTTTCTACTCACTGCTAATATATTTTGCTACATCAATGGGTACGCTTCCAATGGCTGCTCACCAAGTAATGGTTCAAATCTACACTACATGTACAGTATGGGGTGAACCTCTCTCCCAAACTGCTCAATCATTTATGCCTGGGTTGATGTATGGAGTAAATCGGAATTTGGCTAAGGCCCGATTGCTTCTACGGTCTCTTGTAATTATTGGAGGTATTCTTGGATTGTTGTTAGGGATTGTTGGAACATCTGTTCCTTGGTTATTCCCCTACATTTTTACATCTGATCAGATGGTCACCCAAGAGATGCATAGGGTGCTTATTCCATACTTTGTAGCGCTAGCTGTGACACCCCCTACTCTCAGCCTGGAGGGAACATTGCTGGCTGGACGGGAACTAAGATTTATTAGTTTGTCAACAAGTGCATGCTTTTGCCTGGGTGCACTGATATTATTGATCGTTAGTAGTAGATATGGTTTGCAAGGGTGTTGGTTTACCCTCGCTGGATTTCAATGGGCTCGGTTTTCAATGGCCCTTCTTCGCCTTCTCTCCCCCAATGGCATTTTATACTCTGAAGATTTAGGCCGGTATGAGCTATAG 1590 0.4314 MALNLTLSPSSLSTFPNHHLRRRFLLQNATLTPNLRLTPSKHRLVISRVAGGHELTTDSDNNDRNHRINIDENTGNESEKKELTEQSIWNQMKEIVMFTGPATGLWICGPLMSLIDTAVIGQGSSIQLAALGPATVVCDYMSYVFMFLSVATSNMVATAIAKEDREEVQHHISVLLFVGLACGIVMLLFTRLYGAATLTAFAGAKNVHVVPAANTYVQIRGLAWPALLIGWVAQSASLGMKDSWGPLKALAVASVINLIGDILLCTYLGYGIAGAAWATMASQVVAAYMMIQNLNNKGYNAYAFSVPSGEEFFTILALAAPVFLTMMSKVAFYSLLIYFATSMGTLPMAAHQVMVQIYTTCTVWGEPLSQTAQSFMPGLMYGVNRNLAKARLLLRSLVIIGGILGLLLGIVGTSVPWLFPYIFTSDQMVTQEMHRVLIPYFVALAVTPPTLSLEGTLLAGRELRFISLSTSACFCLGALILLIVSSRYGLQGCWFTLAGFQWARFSMALLRLLSPNGILYSEDLGRYEL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0205 529 MobiDBLite consensus disorder prediction 57 81 - -
Lan13g0205 529 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 27 522 IPR044644 -
Lan13g0205 529 CDD MATE_DinF_like 91 514 IPR044644 -
Lan13g0205 529 Pfam MatE 109 261 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lan13g0205 529 TIGRFAM matE: MATE efflux family protein 103 494 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lan13g0205 529 MobiDBLite consensus disorder prediction 55 81 - -
Lan13g0205 529 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 27 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0205 Lan-Chr13 1279942 1285138 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0205 K03327 - gmx:100778295 721.079