Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0176 ATGGCGATGGCTTTCAAAATGGCTACTACTGGTATGTGGGTTACGGATGAGTGTAAGAATTCATTCATGGAAATGAAGTGGAAGAAGGTTCACAAATATGTTGTGTATAAGATCGATGAAAGGTCAAGGCTTGTGACCGTTGATAAGGTGGGTGGTCCTGATGAAGGGTATGATGATCTTGCTGCTTCTTTGCCCAATGATGATTGTAGATATGCTGTCTTCGACTTTGATTTTGTCACTGTTGATAATTGCCACAAGAGCAAGATCTTCTTCATTTATTGGTCTCCAACAGCATCAAGGATAAGAGCAAAGATTCTATACGCAACATCAAAAGATGGGTTAAGAAGAGCTTTGGATGGAATCCACTATGAAGTTCAGGCCACTGATCCAACTGAAATGGGATTCGATATAATTCAAGGCAGAGCCAAATAA 432 0.4028 MAMAFKMATTGMWVTDECKNSFMEMKWKKVHKYVVYKIDERSRLVTVDKVGGPDEGYDDLAASLPNDDCRYAVFDFDFVTVDNCHKSKIFFIYWSPTASRIRAKILYATSKDGLRRALDGIHYEVQATDPTEMGFDIIQGRAK* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0176 143 PANTHER ACTIN DEPOLYMERIZING FACTOR 5-RELATED 5 143 - -
Lan13g0176 143 PANTHER COFILIN-RELATED 5 143 IPR017904 GO:0015629|GO:0030042
Lan13g0176 143 SUPERFAMILY Actin depolymerizing proteins 6 141 - -
Lan13g0176 143 CDD ADF_cofilin_like 10 142 IPR017904 GO:0015629|GO:0030042
Lan13g0176 143 Pfam Cofilin/tropomyosin-type actin-binding protein 18 138 IPR002108 GO:0003779
Lan13g0176 143 Gene3D Severin 8 143 IPR029006 -
Lan13g0176 143 SMART adf_2 16 143 IPR002108 GO:0003779
Lan13g0176 143 ProSiteProfiles ADF-H domain profile. 11 143 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0176 Lan-Chr13 1067335 1068602 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0176 K05765 - pvy:116129213 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0176 13 1067335 1068602 Lan13g0176 13 1067335 1068602 ECH
Lan8g1833 8 24746523 24747896 Lan13g0176 13 1067335 1068602 LSH