Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0170 ATGGCATCAGATGATAAGCCAGCAGAAACAGTAATGGTTGGGAACTATGTTGAAATGGAAGCTGAAGAAGGGAAGTTTAAGGACATAAAAACAAGGTTATCAAGCTTCTTGTGGCATGGTGGTTCTGCTTATGATGCTTGGTTCAGTTGTGCCTCCAACCAGGTGGCACAAGTTCTGCTTACATTGCCATACTCATTCTCCCAGCTAGGAATGGTTTCTGGCATACTTTTTCAACTCTTCTATGGTTTGCTTGGTAGCTGGACTGCTTATCTCATTAGCATACTCTACGTTGAATACAGAACAAGAAAAGAGAGAGAAAAAGTTAATTTCAGGGACCATGTCATCCAGTGGTTTGAGGTTCTTGATGGACTACTTGGGAAGCACTGGAGAAACGTGGGTTTGGCTTTTAACTGCACATTTCTTCTGTTTGGATCTGTTATTCAACTGATAGCTTGTGCAAGCAACATATATTACATAAATGACCATTTGGACAAGAGAACTTGGACTTATATCTTCGGAGCATGTTGTGCCACCACTGTCTTTATCCCTTCCTTTCACAACTACAGAATCTGGTCCTTTGTGGGCCTTGTCATGACCACTTACACTGCTTGGTACCTCACCATTGCCTCTCTCCTCCACGGCCAGGTGGAGGGAGTGAAGCATTCGGGTCCAGCCAAGTTGGTTCTATATTTTACTGGGGCCACAAACATTCTCTACACATTTGGGGGACATGCTGTTACTGTGGAAATAATGCATGCGATGTGGAAGCCACAGAAGTTCAAGGCCATATACTTGCTTGCAACACTATATGTGCTGACACTGACACTTCCATCAGCAATATCAGTGTATTGGGCATTTGGAGACATGCTTCTAAATCACTCCAACGCCTTTGCTCTCTTTCCACAATCACCCTTTCGTGACATGGCTGTCATTTTAATGCTCATCCACCAGTTTATAACATTTGGGTTTGCATGCACACCATTATACTTTGTGTGGGAGAAAGCAATAGGAATGCATGAGTGCAAGAGTCTGTGTAAGCGTGCATTGGTGAGATTACCAGTGGTGATACCCATATGGTTCTTGGCTATAATATTTCCATTCTTTGGACCCATTAACTCCACCGTTGGATCTTTACTTGTTAGCTTCACTGTTTATATCATCCCTGCTCTTGCTCACATCTTCACCTTCAAATCTGCATCAGCACGCCAGAATGCAGTGGAACAACCTCCCAAATTTGTTGGAAGATGGGTAGGATCATTCATTATCAACATATTTATTGTGGTTTGGGTTCTAATAGTAGGGTTTGGATTTGGTGGGTGGGCCAGCATGGTTAACTTCATACACCAGATTGATACATTTGGACTCTTCACAAAGTGTTACCAGTGTCCACCACCTATGCCACCTCCACAAATGGTCAACGCCACCGCGCCTTCCCCACACCACCACCCTCTTGGCCACTGA 1461 0.4394 MASDDKPAETVMVGNYVEMEAEEGKFKDIKTRLSSFLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMVSGILFQLFYGLLGSWTAYLISILYVEYRTRKEREKVNFRDHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFVGLVMTTYTAWYLTIASLLHGQVEGVKHSGPAKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVLTLTLPSAISVYWAFGDMLLNHSNAFALFPQSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRALVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSASARQNAVEQPPKFVGRWVGSFIINIFIVVWVLIVGFGFGGWASMVNFIHQIDTFGLFTKCYQCPPPMPPPQMVNATAPSPHHHPLGH* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0170 486 Pfam Transmembrane amino acid transporter protein 39 432 IPR013057 -
Lan13g0170 486 PANTHER OS05G0424000 PROTEIN-RELATED 3 469 - -
Lan13g0170 486 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 3 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0170 Lan-Chr13 1023276 1027326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0170 1 462 Organic Solute Cotransporters AT2G21050 88.312 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0170 K13946 - gmx:100812002 915.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0170 13 1023276 1027326 Lan13g0170 13 1023276 1027326 ECH
Lan7g0104 7 553749 557228 Lan13g0170 13 1023276 1027326 LSH