Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan13g0150 | ATGGCTTCTTCAGAAACACCTTCACCTTCACCTTCTACACCTAATACTTCTGCTCCTTCAGCTCCATTCTCTTATAACAACAACATGCCTCAAAATGTTATCAACACTTCTCACCACTCCTCTACATACTCGGTTGTTCAACATCCACTTCCTGCTATGTCTTCGCATCCCGCTCCTTCGTTTTCATTCAACATTCCCCAAACTGGTCATCATGCCTTTTCTACCAATCACCATCCACAATCTACCATGAACATGTCAGATTCTGTTGCGCAGGATGTTAGTAAAGTGTCATCTGCATCTAGTATTCCAAATTCTGTGCCCCCTCATTCTTCTAATCCGACAATGCGTCCAACTTATGACCCTAACTATCGCCCACCTACTTCATGGATGCCATCTGCCCCATCTTTCCCTATGCATCATGTAATCCCTGGAACTCCAGGGAACCCTGCTCCTCCTGGATTAACACCAGCTTTGGTAATATCCTCCAATCTATCTGCTCCGTCCACAAGCTCAGATTCTTCCTCAGCTGCGGTTCCAAGACAGAATATGCCAAATGCAGCCATTGCATCAGATCCTACTCTCCAGCAGAAGGGCACACCCTATCCATCCATACCAGTCATGGCCGCTTCCCCTCAGGGACTTTGGTTACCGCCTCCACAGATCAGTGGCGTACTTAGGCCACCTTTTCTTCCATATCCTGCTGCCTTTCCTGGCCCCTTTCCATTTCCAGCACGTGGTGTTACTCTCCCTGCTGTTCCAGTACCTGATTCTCAACCTCCTGGTGTTACTCCAATGACTGCTGCTGGCGTCACTTCTGCATCTCCTGCTTCCAGTCATCAGTTGAGGGGAACAACTGGTTTTCAGACAGAAGTAATTCCAGGGCATGCTGATTACAAGAAAATATTGAATGTGGCACAGAATGAGGATCCTGCTAATGACCATTTAGATGCCTGGACAGCCCACAAGACTGAAGCAGGAATTGTATACTATTATAATGCCTCAACAGGAGAATCAACTTATGATAAACCTGCTGGCTTTAAAGGGGAGCCTCACCAAGTTGCTGTACAGCCGACTCCGGTTTCAATGGTGAACTTGCCTGGTACTGATTGGGTTTTGGTCTCCACTAGTGATGGGAAAAAATATTACTACAACAATCGAACCAAGACAAGTTGCTGGCAAATCCCAAATGAGGTAGCTGAATTGAAAAAGAAACAGGATGGTGATGTTACAAAAGATCATTTAATGTCAGTTCCAAATACTAATGTATTGTCTGATAAAGGGCCTGGAATGGTTACTCTGAATGCTCCTGCTATTAATACTGGTGGTCGTGATGCTGCAGCTCTTAAACCCTCTAGTGTGCAGAGCTCGTCATCGGCACTAGACTTGATCAAGAAGAAGTTGCAGGACTCAGGAACACCTGTTACTTCATCTTCCATTCCTAATTCATCAGTAGGATCTGAATCAAATGGTTCAAAAGCAGCCGAGTCTACAGCTAAAGGCCTTCAGATCGATAATAACAAAGATAAGCAAAAAGATACTAATGGTGATGCTAATGTCTCCGACACATCCTCAGATTCAGAAGATGAAGATAGTGGGCCTTCAAAGGAGGAGTGCATACTTCAGTTTAAGGAGATGCTTAAGGAGCGTGGAGTGGCGCCATTCTCAAAGTGGGACAAAGAACTACCAAAGATAGTATTTGATCCACGTTTTAAGGCTATACCAAGTTATTCTGCTAGGAGGTCCTTGTTTGAGCATTACGTTAAAACCCGTGCAGAAGAAGAACGCAAAGAAAAACGTGCTGCACAAAAGGCTGCAATTGAGGGATTTAAGAAGTTACTGGATGAAGCCTTGGAGGATATTAATCACAACACTGATTATCAAACTTTCCGTGAGAAATGGGGAGATGATCCACGGTTTAAGGCATTGGACCGCAAGGAACGCGAACACTTATTGAGTGAAAGAGTGCTTCCTTTGAAGAAAGCTGCTGAAGAAAAGGCTCAAGCAATGCGCGAAGCTGCTACTTCAAGTTTTAAGTCATTGATTAAAGAGAAAGGAGATATAACTTTTAACTCCCGTTGGTCCAGGGTTAAAGAAAGTTTAAGGGATGACCCAAGATATAAATCTGTGAGGCATGAGGATAGGGAGATTTTGTTCAATGAGTATATATCTGAATTAAAAGCTGCTGAACATGCAGCAGAACGAGAAACCAGAGCCAAAAGAGAGGAGCAGGAGAAGCTGAGAGAGAGAGAACGGGAGCTGCGCAAAAGGAAGGAAAGAGAAGAACACGAGATGGAAAGAGTGCGGCTAAAAATTCGAAGAAAGGAGGCAGTGGCTTCTTTTCAAGCTTTACTTGTGGAGACGATCAAAGACCCTCTGGCATCATGGACGGAATCAAAGTCTAAATTAGAAAAGGATCCTCAAGGACGTGCTAATAATCCTGAACTTGGTCCAGCTGACATGGAAAAGCTCTTTCGTGATCATATAAAGATGCTTCAGGAACGCCGTGTGAACGAGTTTAGAGTACTCTTAGCTGAAGTCTTGACCATTGAAGCTGCATCCAGGGAGACCGAGGATGGGAAAACAGTCCTTAATTCATGGTCTACTGCTAAACGTGTTTTAAAATCTGATCCAAGGTATAACAAGGTTCCCAGAGAAGAAAGGGAAACCTTGTGGCACCGGTATGCAGAGGATGTGTTGCGGCGGCAAAAGTCGTCTCATGATCCAAGGGAAGAGAAACATACAGATTCTAAAGGCAGAGATGCTAAAGCTAGAAACCCTCACGAATCTGGATAA | 2793 | 0.444 | MASSETPSPSPSTPNTSAPSAPFSYNNNMPQNVINTSHHSSTYSVVQHPLPAMSSHPAPSFSFNIPQTGHHAFSTNHHPQSTMNMSDSVAQDVSKVSSASSIPNSVPPHSSNPTMRPTYDPNYRPPTSWMPSAPSFPMHHVIPGTPGNPAPPGLTPALVISSNLSAPSTSSDSSSAAVPRQNMPNAAIASDPTLQQKGTPYPSIPVMAASPQGLWLPPPQISGVLRPPFLPYPAAFPGPFPFPARGVTLPAVPVPDSQPPGVTPMTAAGVTSASPASSHQLRGTTGFQTEVIPGHADYKKILNVAQNEDPANDHLDAWTAHKTEAGIVYYYNASTGESTYDKPAGFKGEPHQVAVQPTPVSMVNLPGTDWVLVSTSDGKKYYYNNRTKTSCWQIPNEVAELKKKQDGDVTKDHLMSVPNTNVLSDKGPGMVTLNAPAINTGGRDAAALKPSSVQSSSSALDLIKKKLQDSGTPVTSSSIPNSSVGSESNGSKAAESTAKGLQIDNNKDKQKDTNGDANVSDTSSDSEDEDSGPSKEECILQFKEMLKERGVAPFSKWDKELPKIVFDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKKLLDEALEDINHNTDYQTFREKWGDDPRFKALDRKEREHLLSERVLPLKKAAEEKAQAMREAATSSFKSLIKEKGDITFNSRWSRVKESLRDDPRYKSVRHEDREILFNEYISELKAAEHAAERETRAKREEQEKLRERERELRKRKEREEHEMERVRLKIRRKEAVASFQALLVETIKDPLASWTESKSKLEKDPQGRANNPELGPADMEKLFRDHIKMLQERRVNEFRVLLAEVLTIEAASRETEDGKTVLNSWSTAKRVLKSDPRYNKVPREERETLWHRYAEDVLRRQKSSHDPREEKHTDSKGRDAKARNPHESG* | 931 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan13g0150 | 930 | Gene3D | FF domain | 831 | 897 | IPR036517 | - | |
| Lan13g0150 | 930 | Gene3D | FF domain | 770 | 830 | IPR036517 | - | |
| Lan13g0150 | 930 | ProSiteProfiles | FF domain profile. | 773 | 830 | IPR002713 | - | |
| Lan13g0150 | 930 | MobiDBLite | consensus disorder prediction | 898 | 930 | - | - | |
| Lan13g0150 | 930 | Coils | Coil | 725 | 777 | - | - | |
| Lan13g0150 | 930 | CDD | WW | 318 | 343 | IPR001202 | GO:0005515 | |
| Lan13g0150 | 930 | PANTHER | TRANSCRIPTION ELONGATION REGULATOR 1 | 67 | 925 | IPR045148 | GO:0003712|GO:0070063 | |
| Lan13g0150 | 930 | SMART | FF_2 | 670 | 724 | IPR002713 | - | |
| Lan13g0150 | 930 | SMART | FF_2 | 773 | 830 | IPR002713 | - | |
| Lan13g0150 | 930 | SMART | FF_2 | 846 | 897 | IPR002713 | - | |
| Lan13g0150 | 930 | SMART | FF_2 | 535 | 589 | IPR002713 | - | |
| Lan13g0150 | 930 | SMART | FF_2 | 602 | 657 | IPR002713 | - | |
| Lan13g0150 | 930 | SMART | ww_5 | 313 | 345 | IPR001202 | GO:0005515 | |
| Lan13g0150 | 930 | SMART | ww_5 | 365 | 397 | IPR001202 | GO:0005515 | |
| Lan13g0150 | 930 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Lan13g0150 | 930 | Pfam | WW domain | 317 | 343 | IPR001202 | GO:0005515 | |
| Lan13g0150 | 930 | Pfam | WW domain | 368 | 395 | IPR001202 | GO:0005515 | |
| Lan13g0150 | 930 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 370 | 397 | IPR001202 | GO:0005515 | |
| Lan13g0150 | 930 | SUPERFAMILY | WW domain | 317 | 348 | IPR036020 | GO:0005515 | |
| Lan13g0150 | 930 | Gene3D | FF domain | 596 | 658 | IPR036517 | - | |
| Lan13g0150 | 930 | Gene3D | FF domain | 521 | 595 | IPR036517 | - | |
| Lan13g0150 | 930 | Gene3D | FF domain | 659 | 736 | IPR036517 | - | |
| Lan13g0150 | 930 | Gene3D | - | 300 | 354 | - | - | |
| Lan13g0150 | 930 | Gene3D | - | 355 | 412 | - | - | |
| Lan13g0150 | 930 | ProSitePatterns | WW/rsp5/WWP domain signature. | 318 | 343 | IPR001202 | GO:0005515 | |
| Lan13g0150 | 930 | MobiDBLite | consensus disorder prediction | 797 | 818 | - | - | |
| Lan13g0150 | 930 | MobiDBLite | consensus disorder prediction | 98 | 117 | - | - | |
| Lan13g0150 | 930 | ProSiteProfiles | FF domain profile. | 602 | 657 | IPR002713 | - | |
| Lan13g0150 | 930 | SUPERFAMILY | WW domain | 369 | 401 | IPR036020 | GO:0005515 | |
| Lan13g0150 | 930 | SUPERFAMILY | FF domain | 594 | 663 | IPR036517 | - | |
| Lan13g0150 | 930 | SUPERFAMILY | FF domain | 828 | 903 | IPR036517 | - | |
| Lan13g0150 | 930 | ProSitePatterns | WW/rsp5/WWP domain signature. | 370 | 395 | IPR001202 | GO:0005515 | |
| Lan13g0150 | 930 | MobiDBLite | consensus disorder prediction | 467 | 535 | - | - | |
| Lan13g0150 | 930 | MobiDBLite | consensus disorder prediction | 733 | 752 | - | - | |
| Lan13g0150 | 930 | SUPERFAMILY | FF domain | 663 | 729 | IPR036517 | - | |
| Lan13g0150 | 930 | MobiDBLite | consensus disorder prediction | 467 | 501 | - | - | |
| Lan13g0150 | 930 | CDD | WW | 368 | 397 | IPR001202 | GO:0005515 | |
| Lan13g0150 | 930 | PANTHER | TRANSCRIPTION ELONGATION REGULATOR HOMOLOG | 67 | 925 | - | - | |
| Lan13g0150 | 930 | SUPERFAMILY | FF domain | 766 | 834 | IPR036517 | - | |
| Lan13g0150 | 930 | ProSiteProfiles | FF domain profile. | 670 | 724 | IPR002713 | - | |
| Lan13g0150 | 930 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 318 | 345 | IPR001202 | GO:0005515 | |
| Lan13g0150 | 930 | ProSiteProfiles | FF domain profile. | 535 | 589 | IPR002713 | - | |
| Lan13g0150 | 930 | SUPERFAMILY | FF domain | 530 | 595 | IPR036517 | - | |
| Lan13g0150 | 930 | Pfam | FF domain | 838 | 893 | IPR002713 | - | |
| Lan13g0150 | 930 | Pfam | FF domain | 540 | 586 | IPR002713 | - | |
| Lan13g0150 | 930 | Pfam | FF domain | 605 | 651 | IPR002713 | - | |
| Lan13g0150 | 930 | Pfam | FF domain | 673 | 721 | IPR002713 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan13g0150 | K12824 | - | gmx:100815386 | 1290.02 |