Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0123 ATGAAGCTCCTTCTTAGTTTGTGTTCAATATTACTATTTGTGTTCAACATTATTGTTCATGTTGTTGCTGAAGACCCTTATAGATTCTTTGATTGGAATGTTACTTATGGAGACATTTATCCTCTTGGAGTTAAACAACAGGGCATTTTTATCAATGGACAATTTCCTGGCCCAGAAATTTATTCTGTTACCAATGATAATTTGATCATTAATGTACACAATAGCTTACCAGAACCGTTTCTTATATCATGGAATGGTGTTCAGCAAAGGAGAAATTCTTATGAAGATGGAGTTTATGGAACTACATGTCCCATCCCTCCAGGGAAGAACTTCACATACACACTTCAAGTCAAAGATCAAATTGGAAGCTTCTTTTATTTCCCATCTCTTGCTTTTCATAAAGCAGCTGGTGGCTATGGTGCCATCAAAGTCCTTAGTAGGCCAAGGATTCCAGTTCCATTCCCTGACCCAGCTAATGATTATTCCCTTCTAATCGGTGATTGGTACCATATCGATCACACGAAATTGAAGTCTATTCTAGATTTTGGACATAGACTTCCATTCCCTCAAGGTGTTTTGATCAATGGTCGTGCAAATGGAACATCATTCACAGTTGAACAAGGGAAAACATACAGGCTTAGAATATCAAATGTTGGGCTTCAAAACACTTTGAACTTTAGGATTGAAGGGCATGACTTGAAATTGGTGGAAGTTGAAGGAACTCACACTGTACAAACCACTTATTCCTCTATTGATGTTCATGTGGGACAATCTTATTCAGTGTTGATTACAGCTGATAAAGCACCCAAAGATTACTACATTGTTGCTTCCACTCGTTTCACTGACAAAGTTATTACAAGTACAGCTTCACTTCACTATAGTAACTCTCAACAACCTATTTCTGGACCAATTCCTAGTGGTCCAACAACTGAGATTGATTGGTCTATTAAACAAGCTCGTTCAATCAGGACAAATTTAACAGCAAGTGGGCCAAGGCCAAATCCACAAGGATCATACCACTATGGTCTTGTGAACATAACTAAGACATTCAAGTTAGAGAGTTCAGCAGCACAAGTTAATGGGAAACAAAGATATGCAATCAATAGTGTATCTTTTATTCTATCTGATGAAACAACTCCTTTGAAGCTAGCAGATTACTTCAAAATTGATGGTGTGTTCCAAGTTGGAAGCATTCCAGATAACCCTTCTAGGAAACCTATGTATCTTGATACTTCAGTCATGGGTGCCGATTTTCGAGCATTTGTTGAGATTGTGTTTCAAAACCATGAAGACATAGTTCAAAGCTACCATATTGATGGATATTCATTTTGGGTTGTAGGTATGGATGGTGGTGCATGGAATCCTAATAGTCGTAATCAGTATAATCTCAGAGATGCAGTTTCAAGGTGTACAACACAGGTATATCCTAAGTCATGGACTGCAATTTATGTAGCACTAGACAATGTGGGTATGTGGAATGTGAGAAGTGAATTTTGGGCACGACAATATCTTGGACAACAATTTTATCTACGAGTATATTCACCAGTTGAATCTATTAGAGATGAATATCCAATTCCAAAGAATGCACTTCTATGTGGTAAAGCTGCTGGAAGAATAACTAGACCACTATCATGA 1635 0.3768 MKLLLSLCSILLFVFNIIVHVVAEDPYRFFDWNVTYGDIYPLGVKQQGIFINGQFPGPEIYSVTNDNLIINVHNSLPEPFLISWNGVQQRRNSYEDGVYGTTCPIPPGKNFTYTLQVKDQIGSFFYFPSLAFHKAAGGYGAIKVLSRPRIPVPFPDPANDYSLLIGDWYHIDHTKLKSILDFGHRLPFPQGVLINGRANGTSFTVEQGKTYRLRISNVGLQNTLNFRIEGHDLKLVEVEGTHTVQTTYSSIDVHVGQSYSVLITADKAPKDYYIVASTRFTDKVITSTASLHYSNSQQPISGPIPSGPTTEIDWSIKQARSIRTNLTASGPRPNPQGSYHYGLVNITKTFKLESSAAQVNGKQRYAINSVSFILSDETTPLKLADYFKIDGVFQVGSIPDNPSRKPMYLDTSVMGADFRAFVEIVFQNHEDIVQSYHIDGYSFWVVGMDGGAWNPNSRNQYNLRDAVSRCTTQVYPKSWTAIYVALDNVGMWNVRSEFWARQYLGQQFYLRVYSPVESIRDEYPIPKNALLCGKAAGRITRPLS* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0123 544 SUPERFAMILY Cupredoxins 343 534 IPR008972 -
Lan13g0123 544 Pfam Multicopper oxidase 160 295 IPR001117 -
Lan13g0123 544 PANTHER MULTI-COPPER OXIDASE 11 536 IPR045087 -
Lan13g0123 544 Pfam Multicopper oxidase 379 514 IPR011706 GO:0005507|GO:0016491
Lan13g0123 544 SUPERFAMILY Cupredoxins 154 333 IPR008972 -
Lan13g0123 544 CDD CuRO_3_AAO_like_1 379 497 IPR034275 GO:0005507
Lan13g0123 544 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Lan13g0123 544 Gene3D - 158 331 IPR008972 -
Lan13g0123 544 Gene3D - 27 148 IPR008972 -
Lan13g0123 544 CDD CuRO_1_AAO_like_1 29 144 IPR034273 GO:0005507
Lan13g0123 544 Gene3D - 342 539 IPR008972 -
Lan13g0123 544 SUPERFAMILY Cupredoxins 21 174 IPR008972 -
Lan13g0123 544 PANTHER MULTI-COPPER OXIDASE TYPE I FAMILY PROTEIN-RELATED 11 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0123 Lan-Chr13 724888 728442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0123 - - gmx:100818914 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0123 13 724888 728442 Lan13g0123 13 724888 728442 ECH
Lan7g0065 7 334362 337955 Lan13g0123 13 724888 728442 LSH