Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0084 ATGGCTTCAAAATCTAGATCCAATTTATCCGAAACTCCGAATAAAGCGTCACTGGCTACACCAAGGGTAAGTAGAGTTAGCAGAGGAGTGTCCAAGACTGAATCTGACTCACCATCACCTTTGCAAAATTCACGCCTTTCTGTGGAACGATCGCCACGATCTGCAAATTCAAAGCCGATTCTTGACCGGAAATCACCAAGACTTACCTCCACCCCACCTGATAAAGTACCCCAGAAACCTGTAAAGGGTTCAGAGTTGCAGAACCAGTTGAATCTTGTTCAAGAAGATCTAAAGAAAGCAAAGGAGCAGCTGATTCTGTCTCAGAAGGAGAAGGTAAAAGCAGTTGATGAGTTGCAAGAAGCGAAGAGGGTGGCCGAGGAAGCAAATGAGAAACTCAGGGAAGCATTGGTGGCTCAAAAGCGGGCCGAGGAGGATTCTGAGATTGAGAAGTTCCGAGCTGTTGAATTGGAACAAGCTGGAATTGAAACTGTAAAGAAGAAGGAAGAAGAATGGCAGAAGGAGATTGAAAGTGTGAGGAACCAGCATGCTTTGGATGTGGCAGCTCTTCTCTCCACAACCCAGGAACTTCAGCGGGTTAAGCAAGAACTCGCCATGACTTGTGATGCAAAGAACCAGGCATTGAATCATGCCGATGATGCAACTAAAATTGCTGAGATTCATGTGGAGAAAACAGAGATTCTTTCAGCCGAAGTGATGCAGTTGAAGTCCTTACTAGATTCAAAACTGGAAACAGAAGCTAGTGAAAATGAGATTATATTGAAGCTGAAAAAAGAGATAGAAGCTCTTAAGCAAGAACTCGAGCAGGCCAAGGATTATGATGAGAAGTTGATAGAGAAAGAAACTTTTATTGAACAGCTTAATGTAGAGCTTGAAGCCACAAAGATGGCTGAATCTTATGCACATAATCTGCTAGGCGAATGGAGGAAGAAGGTTGAGGAACAAGAAGCGAGAGTGAAAGAAGCAAATAAGTTGGAGAAGTCAGCATCAGAATCTCTGGAATCTGTAATGAAGCAGCTAGAAGCAAGCAATGATTTGTTGCACGATGCAGATTCTGAAATTGCTTCTCTTAAAGAGAAAGTGGGATTGTTAGAAATGACAATTGGGAGACATAGGGTAGATATTGAGGATTCGGGGCGCCAAACTCTCATGGCTAAGGAAGAAAGTCTTGAAATGTCAAAGAAGGTCGAGTCTCTCAAATCTGAACTTGAGACAGTTAAGGAAGAGAAAACTCAGGCTTTGAATAATGAAAAGCTTGCAGCATCTAGTGTGCAGACTCTACTAGAAGAGAAAAACAAACTTATCAATGAATTGGATAATTCTAGGCATGAAGAAGAAAAGAGCAAAAAGGCAATGGAAAGCTTAGCTTCTGCATTACATGAAGTATCCGCAGAAGCTAGAGAAGCCAAAGAAAAGCTGCTAAGCAGTGAGGTTGAACGTGAAAGCTACGAGAACCAGATTGAAGATTTGAAGTTAGTCTTAAATGCTACTGGTGAAAAATACAAGTCCATGCTTGATGATGCGCGGCGTGAGATTGATGTTCTCACGTGTAATTTTGAAAACTCTAAGAATGACTTAGAGAATTCCAAAGCTGAGTGGGAGCAGAGAGAAATTCATCTAGTCAGTTGCATAAAGAAAACTGAAGAAGAAAACTCATCCTTTGGGAAAGAAATAAATAGATTGGCCCTTTTGCTAAAAGAAACCGAGGAAGAAGCTAATGCCAGTCGGGAGGAAGAAGCGCAGTTGAAGGAAAATCTGAAGGAAGTTGAGGCTGAGGCAATCCACCTTCAGGAAGCTCTGAAGGAAGTTACGGCTGAGAGCATGAAATTGAAGGAGAGTTTATTGGATAAAGAAAATGAGTTGCAGAGTCTTTTTCATGAAAACGATGAACTCCAAATGAGGGAGGTTGAGTCTATTAAGAAAGTGGATGAGTTATCTAAGTTGCTCGAAGAAGCTACAGCCAGGAACCATGCTGAGGAAAATGGCGATCTTTCAGACAGTGAGCAAGACTATGATTTACTTCCGAAAGTAGTTGAATTTTCTGAAGAGAATGGGCATGGAGGAGAAGACATTTCAAAGCTAGAGCTTCCAATCAATGAAAGTGCTCTCTTGAATGACAATGCTGAAAAAACCGAATCACCCAAACTAGAGAATGTGAATGGAAAACTGAAGGAAGACGAGAATGAAGAAAAGGATGATTCGGCAGAAGTTGAATTTAAAATGTGGGAGAACTGCAAGATAGAGAAAAAGGAATTCTCGCCCGAGAGAGAACTGGAGCCTGAATCTTTCGAAGAAGAAGTTGATCATTCAAAGATAGAACGCGGCAACGAGAGCTTCGATAAGGTAAATGGAACCGCTGTAACATCTATAACCGAGAACACCGATGATGGTGGGAGTTCACCATCAAAGCAACAATCAAAGAAGAAGAAAAAACCTTTGCTTGGGAAGTTTGGAAGCCTGCTAAAGAAAAAGGGTGGTAGCAACCAGAAATAG 2511 0.4174 MASKSRSNLSETPNKASLATPRVSRVSRGVSKTESDSPSPLQNSRLSVERSPRSANSKPILDRKSPRLTSTPPDKVPQKPVKGSELQNQLNLVQEDLKKAKEQLILSQKEKVKAVDELQEAKRVAEEANEKLREALVAQKRAEEDSEIEKFRAVELEQAGIETVKKKEEEWQKEIESVRNQHALDVAALLSTTQELQRVKQELAMTCDAKNQALNHADDATKIAEIHVEKTEILSAEVMQLKSLLDSKLETEASENEIILKLKKEIEALKQELEQAKDYDEKLIEKETFIEQLNVELEATKMAESYAHNLLGEWRKKVEEQEARVKEANKLEKSASESLESVMKQLEASNDLLHDADSEIASLKEKVGLLEMTIGRHRVDIEDSGRQTLMAKEESLEMSKKVESLKSELETVKEEKTQALNNEKLAASSVQTLLEEKNKLINELDNSRHEEEKSKKAMESLASALHEVSAEAREAKEKLLSSEVERESYENQIEDLKLVLNATGEKYKSMLDDARREIDVLTCNFENSKNDLENSKAEWEQREIHLVSCIKKTEEENSSFGKEINRLALLLKETEEEANASREEEAQLKENLKEVEAEAIHLQEALKEVTAESMKLKESLLDKENELQSLFHENDELQMREVESIKKVDELSKLLEEATARNHAEENGDLSDSEQDYDLLPKVVEFSEENGHGGEDISKLELPINESALLNDNAEKTESPKLENVNGKLKEDENEEKDDSAEVEFKMWENCKIEKKEFSPERELEPESFEEEVDHSKIERGNESFDKVNGTAVTSITENTDDGGSSPSKQQSKKKKKPLLGKFGSLLKKKGGSNQK* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0084 836 Coils Coil 430 506 - -
Lan13g0084 836 Coils Coil 511 538 - -
Lan13g0084 836 MobiDBLite consensus disorder prediction 787 807 - -
Lan13g0084 836 MobiDBLite consensus disorder prediction 681 696 - -
Lan13g0084 836 Coils Coil 252 286 - -
Lan13g0084 836 Coils Coil 83 149 - -
Lan13g0084 836 Pfam Weak chloroplast movement under blue light 85 480 IPR008545 -
Lan13g0084 836 Coils Coil 564 640 - -
Lan13g0084 836 Coils Coil 346 366 - -
Lan13g0084 836 MobiDBLite consensus disorder prediction 1 87 - -
Lan13g0084 836 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 10 834 - -
Lan13g0084 836 Coils Coil 648 668 - -
Lan13g0084 836 MobiDBLite consensus disorder prediction 755 784 - -
Lan13g0084 836 MobiDBLite consensus disorder prediction 681 743 - -
Lan13g0084 836 Coils Coil 311 338 - -
Lan13g0084 836 MobiDBLite consensus disorder prediction 1 54 - -
Lan13g0084 836 MobiDBLite consensus disorder prediction 716 743 - -
Lan13g0084 836 Coils Coil 161 181 - -
Lan13g0084 836 PANTHER WEB FAMILY PROTEIN-RELATED 10 834 - -
Lan13g0084 836 Coils Coil 395 422 - -
Lan13g0084 836 MobiDBLite consensus disorder prediction 755 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0084 Lan-Chr13 484730 488344 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0084 - - gmx:100777446 1127.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0084 13 484730 488344 Lan13g0084 13 484730 488344 ECH
Lan8g1909 8 25225929 25229720 Lan13g0084 13 484730 488344 LSH