Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0069 ATGGCTACTTCTCTTGTTCTCAATCGCTCTCTCTCTTCTTTACTCTCTCGTTCCCTTCGTCCTATTTCTTCCATTTCTCGCTCCTTCAACACTAACGCCATGCGCCAGTTCGATGACAAAACTGATGAGCAACGAAATGTCGAACGCTCTGATCGCTCTCTCCCTCGCCGCCGTGACGATTTCTTCTCAGGTAATGTATTTAATCCGTTTTCTTCAACTCGTAGCCTGAGTCAAGTTCTGAACCTGATGGATCAGTTCGTAGAGAATCCATTCCTGAATGCATCGCGTGGAATCGGAGCTGGAGCTGGAGCAGGAGTTAATCGTGGTTGGGATGCAAAAGAGACAGATGATGCTCTTCTTCTCCGCGTGGACATGCCTGGGCTTGGTAAAGAAGATGTGAAGGTTTCGGTAGAGCAGAACACACTCATCATCAAAGGAGTAAGTGATAAAGAAAGTGAGAATGATGAAGAGAACATTCGTAGGTACAGTAGTAGAATTGACTTGCCTGAAAAGCTTTATAAGATCGATCAAATCAAAGCTGAGATGAAGAATGGTGTGCTGAAACTTATTGTGCCTAAGATGAAACAGGAAGAGAAAAACCACGTCTTCAATGTTAGGGTTCAGTAA 627 0.4434 MATSLVLNRSLSSLLSRSLRPISSISRSFNTNAMRQFDDKTDEQRNVERSDRSLPRRRDDFFSGNVFNPFSSTRSLSQVLNLMDQFVENPFLNASRGIGAGAGAGVNRGWDAKETDDALLLRVDMPGLGKEDVKVSVEQNTLIIKGVSDKESENDEENIRRYSSRIDLPEKLYKIDQIKAEMKNGVLKLIVPKMKQEEKNHVFNVRVQ* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0069 208 MobiDBLite consensus disorder prediction 35 58 - -
Lan13g0069 208 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 206 IPR044656 -
Lan13g0069 208 Pfam Hsp20/alpha crystallin family 111 208 IPR002068 -
Lan13g0069 208 MobiDBLite consensus disorder prediction 36 58 - -
Lan13g0069 208 CDD ACD_sHsps-like 111 193 - -
Lan13g0069 208 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 101 208 IPR002068 -
Lan13g0069 208 Gene3D - 25 207 IPR008978 -
Lan13g0069 208 SUPERFAMILY HSP20-like chaperones 89 200 IPR008978 -
Lan13g0069 208 PANTHER 23.6 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0069 Lan-Chr13 379938 380954 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0069 K13993 - pop:7479202 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0036 7 177800 178773 Lan13g0069 13 379938 380954 LSH