Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0038 ATGAAAGGGATGATGAAGTTTGCAGGATATTCCTTCCCACTTTCATTTCTTCCCATTACTTGCAGATTGTCTAATAGGAATTTGTGTAGGCCAATATTCTTTTCTGCTCACACTCAGAAACAAAATTCATATCGTAAATCTGAATCTGGGGTTCTTGCAAAATGCTATCTTCCTCCTTTGTTTAGTGTTGCTCCAATGATGGACTGGACAGATAATCACTATAGGACTCTAGCACGCATCATATCAAAACATGCTTGGCTCTACACCGAGATGGTTGCGTCCGAAACAATTGTTCATCAAAAGGACAATCTGGATAGATTCTTGGAATTTTCTCCAGACCAACATCCCATTGTGCTTCAAATTGGAGGGAGTAATATTGAAAGTTTGGCAAAAGCAACTGAACTTTCTAATGCTTATTGCTATGATGAGATCAACTTAAACTGTGGATGCCCTAGTCCAAAAGTAGCTGGACACGGAGGCTTTGGTGCGAGTCTTATGCTTGACCCAAAGTTTGTTGCCGAGGCTATGTCAGCAATTGCTGCCAACACAAATGTACCTGTCAGTGTCAAATGTCGAATTGGTGTGGATGATCATGATTCTTATGATGAGCTGTGTGATTTCATATGCATGGTTTCTTCTATATCTCCCACTAAGCACTTCATAATTCACTCAAGGAAGGCACTGCTCAATGGCATTAGCCCGGCTGAAAACCGGAGTATTCCTCCACTGAAATATGAATACTTTTATGGTCTCTTACGTGACTTTCCTAACTTAACATTTACAATCAATGGTGGCATTACTAGTGTTGGTGAGATCAATGCTGCTCTTGAAGCTGGGGCTCATGGTGTTATGATTGGACGTGCAGCATACAATAACCCTTGGCATATTTTGGGACATGTTGATACTGCTATTTATGGTGAACCTAGCACTGGTCTTACACGTCGTCAGGTACTTGAAAAATATCAATACTATGGGGACTCAGTGTTGAGAAAATATGGACATAGGCCGACTGTGCGAGATATCGTGAAGCCTTTACTCAATCTTTTCCATTCAGCACCAGGCAATGGACTTTGGAAGCGCAAAGCAGATGCTGCTTTTCGAAATTGCACGACAATCAAATCATTTTTTGAAGAAACTCTTGATGCAATTCCTGACTCGGTATTAGATTCGCCTGTCGCTGAACTACCTCCTGGCCGTGAAGATCTTTTTGCTAACATAGACAACTTGCTGCCTGCTCCATACAGAACAAGAGAAGAGATTGTTATTTGCGCTTAG 1275 0.4141 MKGMMKFAGYSFPLSFLPITCRLSNRNLCRPIFFSAHTQKQNSYRKSESGVLAKCYLPPLFSVAPMMDWTDNHYRTLARIISKHAWLYTEMVASETIVHQKDNLDRFLEFSPDQHPIVLQIGGSNIESLAKATELSNAYCYDEINLNCGCPSPKVAGHGGFGASLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFICMVSSISPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPNLTFTINGGITSVGEINAALEAGAHGVMIGRAAYNNPWHILGHVDTAIYGEPSTGLTRRQVLEKYQYYGDSVLRKYGHRPTVRDIVKPLLNLFHSAPGNGLWKRKADAAFRNCTTIKSFFEETLDAIPDSVLDSPVAELPPGREDLFANIDNLLPAPYRTREEIVICA* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0038 424 Gene3D Aldolase class I 57 299 IPR013785 -
Lan13g0038 424 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 53 422 IPR004653 GO:0002943|GO:0017150
Lan13g0038 424 ProSitePatterns Uncharacterized protein family UPF0034 signature. 144 163 IPR018517 GO:0008033|GO:0017150|GO:0050660
Lan13g0038 424 SUPERFAMILY FMN-linked oxidoreductases 61 361 - -
Lan13g0038 424 Gene3D - 309 375 - -
Lan13g0038 424 CDD DUS_like_FMN 61 294 IPR035587 -
Lan13g0038 424 PANTHER TRNA-DIHYDROURIDINE SYNTHASE 53 422 - -
Lan13g0038 424 Pfam Dihydrouridine synthase (Dus) 63 371 IPR035587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0038 Lan-Chr13 189727 201880 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0038 K05539 - gmx:100779457 695.271