Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0009 ATGATGATGAGTGAGAGTAACGGCAACAAGAAGATTGAAGATCTGAAGAATGAAGATTTATCCCTCTACTTCCTCCAACAACAAATTGAATCATCATTTTCAAATGATGATGATGATGATAATATTGATTCTTCTTCTTCTTCTTCATCTGTTCCAACGGAGCTGAACACAATAAACAGTTCAGGTGGATTCGCGGTGGTATCTAGGGATAAGCTTTCAGTGAAATACACAAACGTGAATCTACACGGCCATGACGTTGGAGTTATACAATCCAACAACCCTGCTCCAACAAACACAATGATTTACTATTTCGAGATATATGTGAAAGACGCTGGTGCTAAAGGTCACATTTCTATTGGATTTACTTCTAATAACTTCAAAATGAGAAGACAACCTGGTTGGGAGCCAAATAGTTGTGGTTATCATGGTGACGATGGTCTTCTTTATTGCGGTCATGCCAAGGGTGAACCCTTTGGTCCTACCTACACTTCTGGTGATATTGTTGGTGCTGGTATTAACTATGCTCAACGTCTTTTCTTTTTCACTAAGAATGCTCAACTTGTTGGCTCTGTTTACAAAGACAACACTATGAATCCTCCTCTTTTCCCAACCATTGCTGTTCACAGTCTTAACGAGGAGGTGCATGTCAACTTTGGCCAGAAACCCTTTACTTTTGACCTAAAGGAATTTGAAGCACAGGAAAGAATGAAGCAGCAAGTCAAAATAGAGGAAATACCTCTTCCCCCAAATGTTAGCTACGGAATTGTTCGTTCCTACCTGCTACACTATGGCTATGAAGATACATTGGATTCATTTGATGTGGCAAGTAGAAGTACCGTTCCTCCTATATGTATAGCTCAAGAAAATGGAAATGATGAGCAGGAAATAACATATGCACTAAATCATAGAAAGACTCTTCGGCAGCTAATCAGGGATGGGGAGATTGATACTGCATTTGGTAAATTGCGTGAATGGTATCCCCAGATTGTTGAGGACAACACATCAGCTACGTGCTTTCTACTTCATTCTCAAAAATTTATTGAATTAGTTCGGGTTGGAGCACTGGAGGAGGCTGTGAGATATGGAAGAACAGAATTGTCAAATTTTTTTGGGTTGCCTGTCTTTCAGGATTTAGTCAAGGACTGTGTTGCTTTGCTGGCATATGAACGACCATTGGAATCCTCAGTAGGTTATCTTTTAAAAGACTCACAGCGTGAAGTTGTGGCTGACACAGTAAATGCCATGATCTTGTCCACAAATCCAAACATGAAAGAATCAAAAAATTGTTTGCACTCCTATCTTGAGAGGTTACTTAGACAGCTCACTGCATGTTGTTTAGAGAGACGATCTTTGAATGGAGATCAGGGAGAAGTTTTCGAACTCCAGCGAGTGCTTTGCGCTGGTAAAAGAGCCTAG 1416 0.4025 MMMSESNGNKKIEDLKNEDLSLYFLQQQIESSFSNDDDDDNIDSSSSSSSVPTELNTINSSGGFAVVSRDKLSVKYTNVNLHGHDVGVIQSNNPAPTNTMIYYFEIYVKDAGAKGHISIGFTSNNFKMRRQPGWEPNSCGYHGDDGLLYCGHAKGEPFGPTYTSGDIVGAGINYAQRLFFFTKNAQLVGSVYKDNTMNPPLFPTIAVHSLNEEVHVNFGQKPFTFDLKEFEAQERMKQQVKIEEIPLPPNVSYGIVRSYLLHYGYEDTLDSFDVASRSTVPPICIAQENGNDEQEITYALNHRKTLRQLIRDGEIDTAFGKLREWYPQIVEDNTSATCFLLHSQKFIELVRVGALEEAVRYGRTELSNFFGLPVFQDLVKDCVALLAYERPLESSVGYLLKDSQREVVADTVNAMILSTNPNMKESKNCLHSYLERLLRQLTACCLERRSLNGDQGEVFELQRVLCAGKRA* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0009 471 SMART SPRY_3 99 222 IPR003877 GO:0005515
Lan13g0009 471 SMART ctlh 299 357 IPR006595 -
Lan13g0009 471 Pfam CTLH/CRA C-terminal to LisH motif domain 301 443 IPR024964 -
Lan13g0009 471 SUPERFAMILY Concanavalin A-like lectins/glucanases 59 225 IPR013320 -
Lan13g0009 471 CDD SPRY_RanBP_like 87 219 IPR044736 -
Lan13g0009 471 Pfam SPRY domain 101 220 IPR003877 GO:0005515
Lan13g0009 471 PANTHER RAN BINDING PROTEIN 9-RELATED 42 468 - -
Lan13g0009 471 SMART toby_final6 353 454 IPR013144 -
Lan13g0009 471 MobiDBLite consensus disorder prediction 32 55 - -
Lan13g0009 471 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 299 357 IPR006595 -
Lan13g0009 471 ProSiteProfiles B30.2/SPRY domain profile. 33 223 IPR001870 -
Lan13g0009 471 Gene3D - 32 239 IPR043136 -
Lan13g0009 471 PANTHER RAN-BINDING PROTEIN M HOMOLOG 42 468 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0009 K23334 - gmx:100805319 744.962