Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0006 ATGGGGGTTTTGGTCATGAGTTCAGGCACAGGCACAGGCTTATCTACCACCACACAACTACGATTACCATCCCAGCGTGTGGTTAATAAATCTTCGCTTTCATTCCGTTCTTCATTTCCCACCACTCTCGCTCTTACCACTCTTCCTCCTCCTTCTCCCACCTACAACGTAAGTATTGGTGGTGGCCGTGGTTGCTCTTTCATCCAAGCTGCATGGACACGAAGATCTAGAGGTGAAGCTGCTAAGAAACCAAACAGGAAATCATGGAAGCAGAGGACAGATATGTACATGAGGCCATTCTTATTGAATGTATTCTTTTCAAAGAGATTTGTTCATGCCAAAGTAATGCACAGAGGAACGAGCAAAGTGATATCTGTTGCTACAACAAATGCAAAAGATCTTAGAAATTCACTTCCATCACTCACAGATAATAACGCTTGCAGACTCATTGGAAAGCTTATTGCTGAGAGATCAAAGGAAGCAGATGTATATGTACTTGCTTATGAACCAAGAAAGGATGAAAGGATTGAAGGTAAACTAGGAATCATCCTTGATACTATCAAAGAGAACGGAATTCTTTTTGTTTGA 588 0.4167 MGVLVMSSGTGTGLSTTTQLRLPSQRVVNKSSLSFRSSFPTTLALTTLPPPSPTYNVSIGGGRGCSFIQAAWTRRSRGEAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFVHAKVMHRGTSKVISVATTNAKDLRNSLPSLTDNNACRLIGKLIAERSKEADVYVLAYEPRKDERIEGKLGIILDTIKENGILFV* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0006 195 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 7 194 IPR005484 GO:0003735|GO:0005840|GO:0006412
Lan13g0006 195 SUPERFAMILY Translational machinery components 96 192 - -
Lan13g0006 195 CDD Ribosomal_L18_L5e 89 192 - -
Lan13g0006 195 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 97 194 IPR005484 GO:0003735|GO:0005840|GO:0006412
Lan13g0006 195 Gene3D Ribosomal protein S11 67 195 IPR036967 GO:0003735|GO:0005840|GO:0006412
Lan13g0006 195 PANTHER OS02G0689700 PROTEIN 7 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0006 Lan-Chr13 35646 36599 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0006 K02881 - rcu:8276086 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0006 13 35646 36599 Lan13g0006 13 35646 36599 ECH