Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1025 ATGAAGCCAGCAAAAGTTTGGCGTGGCATGGGTGATTTGCACATAATGCCTGGCTCGCGCAATCGGCCTAATATAAAGAAACCAATGTGGATCATTGTCTTGGTTCTATTTGTATGTGCCTTTCTAATATGTGCTTATGTGTATCCTCTGCGAAGCAGTTCAGCCTGTTATGTCTTCTCTTCTAGAGGCTGCAAGGGTTTTACTGATTGGCTTCCACCTGTTCCTGTGAGAGAATATACCGATGAGGAGATTGCAGCACGTGTTGTTAATAGGGATATTTTGAATTCACCACCATTTGTTTCAAAACATCCTAAAGTTGCTTTCATGTTTTTATCGCCTGGCTCTCTACCATTTGAAAGATTGTGGGACAAGTTTTTCCAAGGTCATGAAGGGAAGTTCTCTGTTTATGTGCATGCATCCCAGACTAAGCCAGTTCATGTGAGCCGATATTTTCTTAATCGGGATATTCGCAGTAACCAGGTGGTGTGGGGAAAAATTTCTATGGTTGATGCAGAGAGACGGCTATTGGCAAATGCCCTTCAAGATCCTGACAACCAGCAATTTGTTTTACTTTCTGATAGCTGTGTACCTTTGTATAATTTTGACTATATTTACAACTATCTGATGACTACAAATATCAGCTTTGTAGATTGCTTTAAGGATCCTGGCCCTCATGGCAACGGCAGATATTCAGAACACATGTTACCTGAAATTGAGGTGAAGGACTTTAGAAAGGGTGCACAGTGGTTTTCTATGAAGCGGCAGCATGCTGTTTTAGTTATGGCTGATCATCTATATTACTCAAAATTTCAGGCATACTGTCAGCCTGGTTTGGACGGGAAGAATTGCATTGCTGATGAGCACTACTTGCCGACTTTCTTCCAGATGGTTAATCCTGGTGGAATTGCAAACTGGTCATTAACTCATGTTGACTGGTCTGAGAGAAAATGGCATCCAAAATCATATAGGATTCAAGATATTACGTATGAGCTTTTGAAGAATATTACGTCCATTGATGTTAGTGTGCACGTCACCAGTGACGAGAAGAGAGAAGTGCAAAGATGGCCTTGCTTATGGAATGGGATTCAGAAGCCATGTTACCTATTTGCAAGGAAATTCACACCTGAAACACTGGATAAATTGTTGCATCTATTTTCCAATTATTCAACACCTTGA 1176 0.4099 MKPAKVWRGMGDLHIMPGSRNRPNIKKPMWIIVLVLFVCAFLICAYVYPLRSSSACYVFSSRGCKGFTDWLPPVPVREYTDEEIAARVVNRDILNSPPFVSKHPKVAFMFLSPGSLPFERLWDKFFQGHEGKFSVYVHASQTKPVHVSRYFLNRDIRSNQVVWGKISMVDAERRLLANALQDPDNQQFVLLSDSCVPLYNFDYIYNYLMTTNISFVDCFKDPGPHGNGRYSEHMLPEIEVKDFRKGAQWFSMKRQHAVLVMADHLYYSKFQAYCQPGLDGKNCIADEHYLPTFFQMVNPGGIANWSLTHVDWSERKWHPKSYRIQDITYELLKNITSIDVSVHVTSDEKREVQRWPCLWNGIQKPCYLFARKFTPETLDKLLHLFSNYSTP* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1025 391 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 11 390 - -
Lan12g1025 391 Pfam Core-2/I-Branching enzyme 106 335 IPR003406 GO:0016020|GO:0016757
Lan12g1025 391 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 11 390 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1025 Lan-Chr12 16915892 16921233 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1025 - - gmx:100817202 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1025 12 16915892 16921233 Lan1g0382 1 3020332 3025774 LSH
Lan12g1025 12 16915892 16921233 Lan14g0152 14 1861526 1868170 PCT
Lan14g0152 14 1861526 1868170 Lan12g1025 12 16915892 16921233 PCT