Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1008 ATGGAAAATTTACTTAGGAGGAAGTTTTTTATGCTGCTATTATTATTGTGGGTTTCTGTTTGTGCAGTCACAGGCTCAGTGACTTATGATCATAAAGCCATAGTTGTTAATGGGCAGAGAAAAATTTTGATCTCTGGGTCCATTCACTATCCAAGGAGCACACCCCAGATGTGGCCAGACCTTATTCAAAAGGCCAAAGATGGAGGCCTAGATGTTATACAAACCTATGTCTTCTGGAATGGACACGAGCCATCTCCAGGTCAGTATTATTTCGAGGATAGATACGACTTGGTTAAGTTCATCAAGGTGGTGCAGCAAGCTGGCCTCTATGTTCATCTACGCATTGGTCCCTTCATATGTGCTGAATGGAACTTTGGGGGATTTCCTATTTGGCTTAAGTATGTTCCTGGTATTGCTTTCAGAACAGATAACGACCCTTTCAAGGCGGCAACGCAAAATTTTACTGAGAAGATTGTTAGCATGATGAAGGCAGAAAAATTGTTTCAGACTCAGGGAGGTCCAATAATTCTGTCTCAGATAGAGAACGAGTATGGACCAGTGGAGTGGGAAATTGGTGCGCCTGGGAAAGCTTATACTGCATGGGCTGCTAAAATGGCTGTAGGTCTAGACACTGGTGTCCCATGGGTTATGTGTAAGCAACAAGATGCTCCTGATCCTATTATTGACACCTGCAATGGGTATTACTGTGAAAATTACACTCCAAACCAGAAATATAAACCCAAAATGTGGACAGAGAATTGGTCTGGCTGGTACACTGAGTTTGGTGGTGCAGTACCTCGTAGGCCAGCAGAAGACATGGCATTCTCGACTGCAAGATTCATACAAAATGGTGGCTCATTTGTTAACTACTATATGTACCATGGAGGAACTAACTTTGGCCGGACATCCGGTGGCCTCTTCATTGCCACTAGTTATGATTATGATGCTCCACTTGACGAATATGGACTTCTAAATGAACCAAAATGGGGGCACTTGAGAGATTTGCACAAAGCAATCAAGCTATGTGAGCCAGCTTTAGTGTCTGTAGATCCAACTGTGACATGGCCTGGAAAAAACCTGGAGGTACATGTTTTCAAGACAGACTTTGGTGCTTGTGCTGCATTCCTTGCAAATTATGATACCAACTCTTCCGCGAATGTTACATTTGAAAATGGACAGTACGAGCTACCACCTTGGTCTATCAGCATTCTCCCTGACTGCAAAACTGCAGTCTACAACACTGCAATGCTTGGTTCCCAGAGCTCCCAGATGAAGATGACTGCTGTTAACAGTGAATTCACTTGGCAGTCATACAATGAAGAACCTGTGTCATCCAGTGCAGACGATTCCATCGCAGCAGATGCACTTTGGGAGCAGATTAATGTCACCCGAGACTCTACAGATTATTTGTGGTATATGACTGATATCAGCATTGATCCTAATGAAGGTTTTATAAAGAATGGACAAAATCCTGTTCTTACAGCAATGTCAGCAGGCCATGCTCTTCATGTTTTCATTAATGGTCAACTTTCAGGAACTGTGTACGGGAGTTTGGAGAATCCTAAATTAACATTTAGTAACAATGTTAAGCTGATGGTTGGAAATAACAAGATTTCGTTGCTTAGTGTTTCAGTGGGTCTCCCGAATGTTGGTCTGCACTTTGAAACATGGAATGTTGGGGTGTTAGGCCCTGTCACACTTGCTGGTCTAAATGAGGGGACCAGAGACCTGTCAAAACAGAAATGGTCATACAAGATTGGTCTGGAAGGTGAGGCCTTAAACCTTAACACTGAAAGTGGGAGTACCTCTGTTGAATGGGTAGAAGGATCATTACTGGCTGAAAAACAACCTTTGACATGGTACAAGACAACTTTTAGCACACCAGAAGGCAATGATCCATTGGCTCTAGATATGATTAGCATGGGAAAGGGTCACGTATGGATAAATGGTTTGAGCATTGGACGGCATTGGCCTGCATATATAGCCCATGGCAAATGTTGGGATTGTAACTACGCTGGAACTTATACTGATAAAAAATGCAGGACAAATTGTGGAGAACCCTCTCAGAGATGGTACCATGTTCCTCGGTCATGGTTGAAACCAAGTGGGAACTATCTGGTTGTGTTTGAAGAATTTGGAGGTGATCCTACTGGAATTTCTTTGGTGAAAAGAACAACAGCTAGTGTGTGTGCTGATATATATGAAGGGATGCCAACTCTGAAGAATCAGGAGATGCTACACTCTGGTAAACTTGTTAGACCAAAAGCTCATTTGTGGTGTCCAGAAGGTCAAAATATTTCAAAGATTGCATTTGCAAGTTATGGATTACCACAGGGAAGTTGTGGAAACTATAGAGAAGGAAGCTGTCATGCTCACAAATCATATCATGCTCCTGAAAAGAACTGCATTGGCAAGCAATCTTGCTTCGTAACGGTGGATTCTACAGTTTTTGGGGGAGATCCATGTCCAGGGACTGCAAAGAAGTTCTCAGTTGAGGCCTTATGCAGCTAG 2511 0.4289 MENLLRRKFFMLLLLLWVSVCAVTGSVTYDHKAIVVNGQRKILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGQYYFEDRYDLVKFIKVVQQAGLYVHLRIGPFICAEWNFGGFPIWLKYVPGIAFRTDNDPFKAATQNFTEKIVSMMKAEKLFQTQGGPIILSQIENEYGPVEWEIGAPGKAYTAWAAKMAVGLDTGVPWVMCKQQDAPDPIIDTCNGYYCENYTPNQKYKPKMWTENWSGWYTEFGGAVPRRPAEDMAFSTARFIQNGGSFVNYYMYHGGTNFGRTSGGLFIATSYDYDAPLDEYGLLNEPKWGHLRDLHKAIKLCEPALVSVDPTVTWPGKNLEVHVFKTDFGACAAFLANYDTNSSANVTFENGQYELPPWSISILPDCKTAVYNTAMLGSQSSQMKMTAVNSEFTWQSYNEEPVSSSADDSIAADALWEQINVTRDSTDYLWYMTDISIDPNEGFIKNGQNPVLTAMSAGHALHVFINGQLSGTVYGSLENPKLTFSNNVKLMVGNNKISLLSVSVGLPNVGLHFETWNVGVLGPVTLAGLNEGTRDLSKQKWSYKIGLEGEALNLNTESGSTSVEWVEGSLLAEKQPLTWYKTTFSTPEGNDPLALDMISMGKGHVWINGLSIGRHWPAYIAHGKCWDCNYAGTYTDKKCRTNCGEPSQRWYHVPRSWLKPSGNYLVVFEEFGGDPTGISLVKRTTASVCADIYEGMPTLKNQEMLHSGKLVRPKAHLWCPEGQNISKIAFASYGLPQGSCGNYREGSCHAHKSYHAPEKNCIGKQSCFVTVDSTVFGGDPCPGTAKKFSVEALCS* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1008 836 Gene3D - 747 836 IPR043159 -
Lan12g1008 836 Gene3D - 437 582 - -
Lan12g1008 836 Pfam Galactose binding lectin domain 758 835 IPR000922 GO:0030246
Lan12g1008 836 SUPERFAMILY Galactose-binding domain-like 401 571 IPR008979 -
Lan12g1008 836 PANTHER BETA-GALACTOSIDASE 8 830 - -
Lan12g1008 836 Gene3D Glycosidases 21 342 - -
Lan12g1008 836 PANTHER BETA-GALACTOSIDASE RELATED 8 830 IPR001944 GO:0004553|GO:0005975
Lan12g1008 836 Gene3D - 589 730 - -
Lan12g1008 836 PRINTS Glycosyl hydrolase family 35 signature 37 54 IPR001944 GO:0004553|GO:0005975
Lan12g1008 836 PRINTS Glycosyl hydrolase family 35 signature 58 76 IPR001944 GO:0004553|GO:0005975
Lan12g1008 836 PRINTS Glycosyl hydrolase family 35 signature 113 132 IPR001944 GO:0004553|GO:0005975
Lan12g1008 836 PRINTS Glycosyl hydrolase family 35 signature 170 185 IPR001944 GO:0004553|GO:0005975
Lan12g1008 836 PRINTS Glycosyl hydrolase family 35 signature 249 264 IPR001944 GO:0004553|GO:0005975
Lan12g1008 836 PRINTS Glycosyl hydrolase family 35 signature 286 301 IPR001944 GO:0004553|GO:0005975
Lan12g1008 836 PRINTS Glycosyl hydrolase family 35 signature 306 322 IPR001944 GO:0004553|GO:0005975
Lan12g1008 836 PRINTS Glycosyl hydrolase family 35 signature 616 630 IPR001944 GO:0004553|GO:0005975
Lan12g1008 836 PRINTS Glycosyl hydrolase family 35 signature 643 659 IPR001944 GO:0004553|GO:0005975
Lan12g1008 836 SUPERFAMILY Galactose-binding domain-like 581 738 IPR008979 -
Lan12g1008 836 Pfam Glycosyl hydrolases family 35 34 338 IPR031330 -
Lan12g1008 836 ProSiteProfiles SUEL-type lectin domain profile. 750 836 IPR000922 GO:0030246
Lan12g1008 836 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 172 184 IPR019801 GO:0004553|GO:0005975
Lan12g1008 836 Pfam Beta-sandwich domain in beta galactosidase 346 415 IPR041392 -
Lan12g1008 836 SUPERFAMILY (Trans)glycosidases 26 343 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1008 Lan-Chr12 16763638 16769470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1008 1 836 Glycoside Hydrolase AT3G13750 68.252 0.0 1221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1008 - - gmx:106795462 1535.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1008 12 16763638 16769470 Lan15g0138 15 1438454 1444376 PCT
Lan15g0138 15 1438454 1444376 Lan12g1008 12 16763638 16769470 PCT