Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0908 ATGGCCTCACATGTCACATATTTTAGTATCCACTATCCTTTTCTTTCAACAAACATGACAACCTTAAACTCCTTCACTCTTTTCTTCTTCCTTCAAGCTATGTTTTTCATGATTTCAATACCAACAAGCCACTCCACACTGATAGAGGACACTTGCCACAAGACACCATACTATGATGTTTGCATTAATTCTCTTAACTCAAGTCCTGGAAGCTCTAGTGCTGATGTCAGTGGTCTTGCTCTAATCATGGTGAAAGTGATAGAAACAAAAGCAAATGTTGCCTTAAATAAAATCCATGAGCTTCAAAAATCAGGATCTAGTGCAGGTTTGACTTCTTGTGCTAGTAAATATAATGCAATTTTGGTAGCTGATATCCCAAGTGCCACTGAAGCACTGCAAAAAGGGAACCCCAAGTTTGCAGAAGATGGTGCAAATGATGCTGCTAATGAAGCTACTTATTGTCAATCTGATTTACCTGGACCACTCACCGCAGAGAATGGTGCTGTGCATGATGTTGCAGCTGTTACTGCAGCTATTGTTAGACTATTACTTTAA 555 0.3928 MASHVTYFSIHYPFLSTNMTTLNSFTLFFFLQAMFFMISIPTSHSTLIEDTCHKTPYYDVCINSLNSSPGSSSADVSGLALIMVKVIETKANVALNKIHELQKSGSSAGLTSCASKYNAILVADIPSATEALQKGNPKFAEDGANDAANEATYCQSDLPGPLTAENGAVHDVAAVTAAIVRLLL* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0908 184 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 183 IPR035513 -
Lan12g0908 184 CDD CIF_like 47 183 IPR034087 GO:0004857|GO:0043086
Lan12g0908 184 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 25 184 - -
Lan12g0908 184 Pfam Plant invertase/pectin methylesterase inhibitor 47 179 IPR006501 GO:0004857
Lan12g0908 184 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 184 IPR035513 -
Lan12g0908 184 SMART PMEI_2 43 179 IPR006501 GO:0004857
Lan12g0908 184 PANTHER PECTINESTERASE INHIBITOR-LIKE 25 184 - -
Lan12g0908 184 TIGRFAM PME_inhib: pectinesterase inhibitor domain 22 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0908 Lan-Chr12 16054580 16055411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0908 - - gmx:100500640 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0908 12 16054580 16055411 Lan12g0908 12 16054580 16055411 ECH