Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0907 ATGAAAAACTTCAACTCCTTAACTCTTATCTTTTGCCTTCAAGCTATGTTCATCATTATTTCAATACCATCATGCCACAGCAGAACCTTCAACCCAAAGAATGATAAACTTATAGAGAGCACTTGCAAGAAGACACCAAATTACATTGTTTGCATTAATTCTCTTAAACCAAGTCCTGGAAGCTCTAGTGCTGATGTTAGAGGTCTTGCTCTAATCATGGTGAAAGTGATGGAAACAAAAGCAAATGATGCCTTAAATAAAATCCATGAACTTCAAAGGGTGTTAACTGGACATAACCAAAAAGTAGCCTTGAATTCTTGTGCTAGCAAATATAATGCAATTTTGGTAGCTGATATTCCAAGTGCCACTGAAGCATTGCAAAAAGGGGACCCCAAGTTTGCAGAAGATGGTGCAAATGATGCTGCTAATGAAGCTACTTATTGTGAAACTGATTACCCTGCTGGGACTTTACCTCTCACCAAATGGAATAATGCTATGCATGATGTTGCAGCTGTTACAGCAGCTATTGTTAGATCATTACTCTAG 546 0.3791 MKNFNSLTLIFCLQAMFIIISIPSCHSRTFNPKNDKLIESTCKKTPNYIVCINSLKPSPGSSSADVRGLALIMVKVMETKANDALNKIHELQRVLTGHNQKVALNSCASKYNAILVADIPSATEALQKGDPKFAEDGANDAANEATYCETDYPAGTLPLTKWNNAMHDVAAVTAAIVRSLL* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0907 181 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 180 IPR006501 GO:0004857
Lan12g0907 181 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 180 IPR035513 -
Lan12g0907 181 Coils Coil 74 101 - -
Lan12g0907 181 CDD CIF_like 35 180 IPR034087 GO:0004857|GO:0043086
Lan12g0907 181 SMART PMEI_2 33 176 IPR006501 GO:0004857
Lan12g0907 181 PANTHER PECTINESTERASE INHIBITOR-LIKE 18 180 - -
Lan12g0907 181 Pfam Plant invertase/pectin methylesterase inhibitor 37 176 IPR006501 GO:0004857
Lan12g0907 181 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 181 IPR035513 -
Lan12g0907 181 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 18 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0907 Lan-Chr12 16048983 16049820 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0907 - - gmx:100500640 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0907 12 16048983 16049820 Lan12g0907 12 16048983 16049820 ECH