Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0906 ATGAAGAGTACTTCAGCCTCTATATCCTCTTTTGCACTCCACATTCTTCTATTCTCTTATGTTTTCTTTACACTAGCTCATTCCTCAGTCCTATTGGAGGGTAAGGGTGATGGTGATTTGGTAGAACAAATATGCAAAAAGACACCCTTTTATGATTTATGCAGTAATATCCTACATTCAAACCCTCTAGCCCCCAAAAGTGATCCAAAGGGTATAGCACTCATTATGGTGAATAACATTCTGGAAAATGCTACTGACACATTGAGTTATATTGAAGAGTTGATTAAGCAAACCTCAGACCAAAAGTTGGAGCAAGATTTGGCTTTCTGTGCTGAGTCATACATCCCAGTTGTGAAGTACATTCTTCCACAAGCTGCTGAAGCCATAAGCCAAGGTAGATTTGGTTTTGCTAGTTACAGCATAGCTGATGCTGAGAAGGAAGTTGATGCTTGCAACAAGAAATTTCCTGGCTCAACTCAATCACCCTTAGGTGATAGAAACAACATTATGCAGAAGCTGGTTGATGTGGCTTCGGCCATAGTAAAACTATTATTAAATGGCTGA 564 0.3954 MKSTSASISSFALHILLFSYVFFTLAHSSVLLEGKGDGDLVEQICKKTPFYDLCSNILHSNPLAPKSDPKGIALIMVNNILENATDTLSYIEELIKQTSDQKLEQDLAFCAESYIPVVKYILPQAAEAISQGRFGFASYSIADAEKEVDACNKKFPGSTQSPLGDRNNIMQKLVDVASAIVKLLLNG* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0906 187 SMART PMEI_2 36 180 IPR006501 GO:0004857
Lan12g0906 187 TIGRFAM PME_inhib: pectinesterase inhibitor domain 15 184 IPR006501 GO:0004857
Lan12g0906 187 CDD CIF_like 39 184 IPR034087 GO:0004857|GO:0043086
Lan12g0906 187 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 187 - -
Lan12g0906 187 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 10 187 - -
Lan12g0906 187 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 184 IPR035513 -
Lan12g0906 187 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 185 IPR035513 -
Lan12g0906 187 Pfam Plant invertase/pectin methylesterase inhibitor 39 180 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0906 Lan-Chr12 16044585 16045626 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0906 - - gmx:100820305 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0906 12 16044585 16045626 Lan12g0906 12 16044585 16045626 ECH