Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0902 ATGGACACCAACAACGATTCCAAAAAAGTTGAAAACTCCTCTGTTCAAATGGATTCTGATGACTTTTCTTCTGTTCAGCGAAAAGACAGAGAAAAAGAGGAGCTCACTGAGACGATGAACAAACTACATATTGAAGGATCATCATCTGGGACTGGGAGTGGACCCTTCAAAAGAAAACCGGTTATTATCATAGTTGTAGGAATGGCAGGGAGTGGGAAAACAACACTTCTCCATAGGTTGGTTGCCCATACACACCAAAAAAACATTCGGGGGTATGTGATGAATCTTGACCCAGCTGTCATGACACTCCCATTTGCTTCTAACATTGATATAAGAGACACGGTCAAGTACAAAGAAGTCATGAAGCAGTTCAACCTTGGCCCTAATGGAGGAATCATGACCTCCCTTAACTTGTTTGCTACCAAATTTGATGAGGTAGTTTCTGTTATTGAGAAGCGAGCTGATCAACTTGATTATGTTCTTGTGGATACCCCTGGCCAGATTGAGATATTCACCTGGTCTGCTTCTGGAGCTATAATCACAGAAGCTTTTGCCTCCACATTTCCCACTGTAGTTACCTATGTAGTTGATACACCTCGTGCAGAGAATCCCACCACTTTCATGAGCAACATGCTTTATGCTTGTAGTATTCTCTACAAGACAAGGTTACCTCTCATTTTGGCATTCAACAAGGTTGATGTTGCACAACATGAGTTTGCCTTGGAGTGGATGGAGGATTTTGAGGCATTCCAAGCAGCAGTAAGTTCAGATCAATCGTACACATCAACTTTAACTCAGAGCCTCTCTCTTGCACTGGATGAATTCTACAAGAATTTAAGATCAGTTGGAGTTTCTGCAGTTTCTGGTGCAGGAATTGATGCCTTCTTTAAGGCTGTCGAAACCAGTGCAGAGGATTACATGGAGAACTACAAGGCTGATCTTGATAAAAGACGTGAAGAGAAGCTGCGTTTGGAGGAAGACCGCAAGAGGGAGAGCATGGATAAATTGAGGAGGGACATGGAGAAATCTGGGGGAGAAACTGTAGTCTTGAGCACTGGTTTAAAGGACAAAGAAAAAGGGAGTAAAAGCATGATGGATGAAGACGAGGTTGAAGAGGATGAGGACATGGATGATGATGATGATTTGGGGATATATAGTGAAGAGGATGATGCTATAGATGAGGACGAAGATGAGGAGGTTGATAGGTTCGTGATGTGA 1218 0.4269 MDTNNDSKKVENSSVQMDSDDFSSVQRKDREKEELTETMNKLHIEGSSSGTGSGPFKRKPVIIIVVGMAGSGKTTLLHRLVAHTHQKNIRGYVMNLDPAVMTLPFASNIDIRDTVKYKEVMKQFNLGPNGGIMTSLNLFATKFDEVVSVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRAENPTTFMSNMLYACSILYKTRLPLILAFNKVDVAQHEFALEWMEDFEAFQAAVSSDQSYTSTLTQSLSLALDEFYKNLRSVGVSAVSGAGIDAFFKAVETSAEDYMENYKADLDKRREEKLRLEEDRKRESMDKLRRDMEKSGGETVVLSTGLKDKEKGSKSMMDEDEVEEDEDMDDDDDLGIYSEEDDAIDEDEDEEVDRFVM* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0902 405 MobiDBLite consensus disorder prediction 1 35 - -
Lan12g0902 405 Coils Coil 25 45 - -
Lan12g0902 405 MobiDBLite consensus disorder prediction 325 405 - -
Lan12g0902 405 Pfam Conserved hypothetical ATP binding protein 65 302 IPR004130 -
Lan12g0902 405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 300 IPR027417 -
Lan12g0902 405 Gene3D - 60 318 IPR027417 -
Lan12g0902 405 PANTHER XPA-BINDING PROTEIN 1-RELATED 24 401 IPR004130 -
Lan12g0902 405 MobiDBLite consensus disorder prediction 352 366 - -
Lan12g0902 405 CDD GPN1 61 301 - -
Lan12g0902 405 MobiDBLite consensus disorder prediction 325 344 - -
Lan12g0902 405 Coils Coil 307 339 - -
Lan12g0902 405 PANTHER GPN-LOOP GTPASE 24 401 - -
Lan12g0902 405 MobiDBLite consensus disorder prediction 367 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0902 Lan-Chr12 16028321 16032334 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0902 K24104 - gmx:100797318 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0902 12 16028321 16032334 Lan12g0902 12 16028321 16032334 ECH