Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0891 ATGAACAGCGGAAGCAGCAACTTAGAGACACGGTCAGTATTGGATGAGTTAAGTAGCTTTAACAAAGGAGGACTCTTCGATCTTGGACACCCTCTTCTTAACCGTATTCTTGAGAGTTTCGTCAAAGCTGCAGGGATAGGTGCTGTTCAAGCTGTGTCCCGTGAGGCCTATTTCACTGCTGTTCAAGGTTCAGGGGGGCTAGATAATGCAGGTGGTATGCCTCTAGAAGTTGGTGGCAAGAAACATCGTTTCCCTGGTCTCAGAGGAGAGACAAGCAGCAAATCCATTGAAGCTATGGTGAAAAATACTGGCAAAGAGTCCTTTCAATGGGGATTGGCTGCAGGAATATATTCAGGTCTCACCTATGGGCTGAAGGAAGCTCGTGGAGCTCATGATTGGAAAAATAGTGCAGTTGCTGGAGCACTTACTGGGGCGGCACTTGCAGTTACATCAGACAACTCATCTCATGAACATATTGTGCAATGTGCTATCACTGGAGCAGCAATCTCCACTGCTGCAAATCTTCTAACTGGGATATTTTAA 543 0.4622 MNSGSSNLETRSVLDELSSFNKGGLFDLGHPLLNRILESFVKAAGIGAVQAVSREAYFTAVQGSGGLDNAGGMPLEVGGKKHRFPGLRGETSSKSIEAMVKNTGKESFQWGLAAGIYSGLTYGLKEARGAHDWKNSAVAGALTGAALAVTSDNSSHEHIVQCAITGAAISTAANLLTGIF* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0891 180 PANTHER OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC 6 180 - -
Lan12g0891 180 Pfam Tim17/Tim22/Tim23/Pmp24 family 33 170 - -
Lan12g0891 180 PANTHER TIM23 6 180 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0891 Lan-Chr12 15936650 15938389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0891 - - qlo:115994830 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0891 12 15936650 15938389 Lan12g0891 12 15936650 15938389 ECH