Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0889 ATGCATTCCACTCTCTCGCTCTCTTTCTCCGCCGCCACAATCTCCAAACCACACCACTATACCTCTCACTCTCTTCCCTTCACCACCGCAAAGCCACTTAATCTCCGATTTTGTGGATTGAAGAGTGAAGTGTTAGGTTTCACTGCTACTTCTCTTAATCGCCGTCATGCTCAGCTTCCTTGCCGTACAAACTCCAATACAGTAGTATCGGCTGCGCTCTCTAGCAATGGCACGCCTCCTAAATCATTCGATTATGATTTGTTGATTATTGGAGCCGGTGTTGGTGGCCACGGTGCTGCGCTTCATGCTGTTGAGAAGGGTTTGAAAACAGCTATTGTGGAGGGAGATGTGGTGGGAGGAACATGTGTCAACAGAGGATGTGTTCCTTCAAAAGCTCTTTTGGCAGTGAGTGGTCGTATGCGGGAACTAAAGAGTGATCATCACTTGAAGTCATTGGGCTTACAGGTTTCAGGTGCTGGATATGACAGACAAGGAGTGGCTGACCATGCTAATAATCTTGCTACCAAAATCCGTAGTAACTTAACGAACTCAATGAAAGCACTTGGAGTAGACATACTTACTGGTTTTGGAACTATTGTGGGTCCTCAAAAGGTGAAAATTGGCTCTTCAGACAAAATAGTAACTGCAAAAGATATCATCATTGCCACGGGTTCTATTCCTTTTGTTCCTAAGGGCATTGAAGTGGATGGGAAAACTGTGATTACCAGTGACCATGCACTCAAGCTGGAGTCTGTTCCTGATTGGATAGCAATTGTAGGAAGTGGTTATATTGGCCTTGAATTCAGTGATGTATATACAGCACTTGGAAGTGAGGTCACTTTTGTCGAAGCATTAGATCAGCTTATGCCTGGATTTGATCCTGAAATTAGCAAGTTGGCTCAAAGGGTTCTTATAAATCCCAGGAATATTGACTATCACACTGGAGTTTTTGCATCTAAAATCACGCCTGCGAGGGATGGAAAACCTGTCTTGATTGAGCTCATTGATGCAAAGACCAAGGAACCGAAGGACACTTTGGAGGTGGATGCTGCACTAATAGCAACTGGAAGGGCCCCTTTCACACAAGGTCTAGGATTGGAGAATATTGATGTGGTAACACAACGTGGTTTTATTCCCGTGGATGAGCGCATGCGAGTAACTGATGCAAATGGCAAGCTGGTGCCAAATTTATATTGCATCGGTGATGCTAATGGCAAGATGATGCTTGCTCATGCTGCCAGTGCACAAGGAATTTCAGTGGTTGAACAACTTACTGGAAGAGATCATGTGCTCAATCATTTAAGTATTCCAGCTGCTTGTTTCACTCATCCTGAAATCAGCATGGTTGGGTTGACAGAGCCTCAAGCAAGGGAGAAAGGTGAAAAAGAGGGTTTTGAAGTAAGTGTTGCCAAAACAAGTTTTAAAGCTAACACAAAGGCCCTAGCAGAAAATGAAGGAGAGGGAATTGCCAAGTTGATATACAGACCTGACAATGGAGAGATACTAGGAGTTCACATTTTTGGTTTGCATGCAGCAGATCTCATCCATGAAGCATCCAATGCAATAGCATTAGGGACACGTATTCAGGACATTAAATTAGCAGTTCACGCACATCCAACTCTGTCTGAGGTTCTTGATGAGCTATTTAAATCAGCCAAGGTTAAAGAACAAGCCTCTAGCCCAGGACTTCCAAAATATTATACAACTTCAGGCCGAGGATCTCAGCACATTCAGAATCCTGTAAAAGAAGAAAAGCATTTAGATGAGACTATTAATGACCAGATAATGGATCGCCGCCAAATGTTACAGGATTTGATGTCATTTGTTGATGGTATTATTAGTGTCTGCCAAAGATTCCTATCATTATTACTGCATTTTTTAGAGAGTATCCTATTTTAA 1899 0.4297 MHSTLSLSFSAATISKPHHYTSHSLPFTTAKPLNLRFCGLKSEVLGFTATSLNRRHAQLPCRTNSNTVVSAALSSNGTPPKSFDYDLLIIGAGVGGHGAALHAVEKGLKTAIVEGDVVGGTCVNRGCVPSKALLAVSGRMRELKSDHHLKSLGLQVSGAGYDRQGVADHANNLATKIRSNLTNSMKALGVDILTGFGTIVGPQKVKIGSSDKIVTAKDIIIATGSIPFVPKGIEVDGKTVITSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEISKLAQRVLINPRNIDYHTGVFASKITPARDGKPVLIELIDAKTKEPKDTLEVDAALIATGRAPFTQGLGLENIDVVTQRGFIPVDERMRVTDANGKLVPNLYCIGDANGKMMLAHAASAQGISVVEQLTGRDHVLNHLSIPAACFTHPEISMVGLTEPQAREKGEKEGFEVSVAKTSFKANTKALAENEGEGIAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKLAVHAHPTLSEVLDELFKSAKVKEQASSPGLPKYYTTSGRGSQHIQNPVKEEKHLDETINDQIMDRRQMLQDLMSFVDGIISVCQRFLSLLLHFLESILF* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0889 632 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 436 547 IPR004099 GO:0045454
Lan12g0889 632 PANTHER DISULFIDE OXIDOREDUCTASE 17 560 - -
Lan12g0889 632 PRINTS Pyridine nucleotide disulphide reductase class-I signature 86 108 - -
Lan12g0889 632 PRINTS Pyridine nucleotide disulphide reductase class-I signature 118 133 - -
Lan12g0889 632 PRINTS Pyridine nucleotide disulphide reductase class-I signature 219 228 - -
Lan12g0889 632 PRINTS Pyridine nucleotide disulphide reductase class-I signature 255 280 - -
Lan12g0889 632 PRINTS Pyridine nucleotide disulphide reductase class-I signature 349 363 - -
Lan12g0889 632 PRINTS Pyridine nucleotide disulphide reductase class-I signature 397 404 - -
Lan12g0889 632 PRINTS Pyridine nucleotide disulphide reductase class-I signature 432 453 - -
Lan12g0889 632 PRINTS Pyridine nucleotide disulphide reductase class-I signature 501 516 - -
Lan12g0889 632 PRINTS Pyridine nucleotide disulphide reductase class-I signature 523 543 - -
Lan12g0889 632 PANTHER DIHYDROLIPOAMIDE DEHYDROGENASE 17 560 - -
Lan12g0889 632 SUPERFAMILY FAD/NAD(P)-binding domain 70 426 IPR036188 -
Lan12g0889 632 Pfam Pyridine nucleotide-disulphide oxidoreductase 85 417 IPR023753 GO:0016491
Lan12g0889 632 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 435 549 IPR016156 GO:0016491|GO:0050660
Lan12g0889 632 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 119 129 IPR012999 GO:0016668
Lan12g0889 632 Gene3D - 435 559 IPR016156 GO:0016491|GO:0050660
Lan12g0889 632 Gene3D - 228 355 IPR036188 -
Lan12g0889 632 PRINTS FAD-dependent pyridine nucleotide reductase signature 87 106 - -
Lan12g0889 632 PRINTS FAD-dependent pyridine nucleotide reductase signature 216 234 - -
Lan12g0889 632 PRINTS FAD-dependent pyridine nucleotide reductase signature 255 273 - -
Lan12g0889 632 PRINTS FAD-dependent pyridine nucleotide reductase signature 348 364 - -
Lan12g0889 632 PRINTS FAD-dependent pyridine nucleotide reductase signature 382 404 - -
Lan12g0889 632 Gene3D - 85 418 IPR036188 -
Lan12g0889 632 TIGRFAM lipoamide_DH: dihydrolipoyl dehydrogenase 85 554 IPR006258 GO:0004148|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0889 Lan-Chr12 15917020 15922692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0889 1 560 Acyl Lipid Metabolism Gene Families AT3G16950 82.801 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0889 K00382 - gmx:100809578 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0889 12 15917020 15922692 Lan12g0889 12 15917020 15922692 ECH