Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0833 ATGGGAGACAGAGGCAGCAACATCAATTCAATTCATAGATCAAGTTCAAGGCCTCAACTAGATCTGAGCAAAGCAGAAATTGAAGCAAATATTGATGAAGACAAGTATCCAACTATTCTGTTACCCAATCAATCTGATCATTTATCTCATCTTGCTCTTGACCTTGGAGGTTCTCTTATAAAGTTGGTGTATTTTTCAAGACATGAAGACCAATCAGGCAATGATAGAAGGATGAGAAGTGTTAAGGATAGAATGGGACTTCCGAATCGTAACAGGAGAACCTATCGTGTTCTTGGTGGGAGGCTTCATTTTCTCATGTTTGAGACAAGCAAGATTAATGAGTGCTTAGATTTCATTCACTCAAAGAAGCTCCATTGTGGTGGTAGTGGATGGGAATCTCATGATTACGATGATGTGGCTGACCGGAATGCCATAATTAAGGCTACTGGTGGTGGAGCATACAAATTTGCTGACCTTTTCAAAGAAAGACTGGGAGTTAGTTTGGACAAAGAAGACGAAATGGCCTGTATGGTAGCTGGAGCAAATTTCTTGCTAAAGGCAATTCGCCATGAAGCTTTTACGCACATGGAGGGCCAGAAAGAGTTTCTTCAAATTGATCATAATGATCTGTATCCTTATCTTCTAGTTAATATTGGATCTGGTGTTAGTATAATCAAGGTTGACGGGGATGGGAAATTTGAGAGGGTTAGTGGGACAAATGTTGGTGGTGGTACTTATTGGGGCTTGGGAAGACTGTTAACAAAGTGCCAGAGCTTTGATGAGTTGCTTGAGCTGAGTCAGAAAGGAGATAATAGAAACATTGACATGCTTGTTGGGGACATTTATGGTGGCATGGACTATTCTAAGATTGGCCTATCGGCTAGCACCATTGCTTCAAGTTTTGGCAAGGCTACATCAGAAAAAAAGGAGCTTGAAGATTACAGACCTGAAGATATATCACTCTCTCTTCTACGAATGATCTCATACAATATTGGCCAGATCTCTCACTTGAATGCAATGCGATTTGGGTTGAAGCGTATATTTTTTGGAGGATTCTTTATAAGGGGTCATGCCTATACTATGGACGCTATTTCTTTTGCAGTTCATTTCTGGTCTAAAGGGGCTGCACAAGCAATGTTCTTGCGACATGAAGGATTTCTTGGAGCTTTAGGTGCATTTATGAGCTATGAAAAGCATGGTTTGGATGACCTTATGGTGCATCAGTTAGTTGAAAGATTCCCAATGGGTGCTCCATATACAGGGGGCAAGATTCATGGCCCACCACTTAAGGATTTGGATGAGAAGATTTCATGGATGGAAAAGTTTCTGCAAATGGGAACTGAAATAACTGCTCCTGTACCGATGGCTCTTCCTCGAACTACTGGACTTGGGGGTTTTGAAGTTCCTTTATCAAAAGGAAGTACTCTGCGATCTGATGCTAGTGCTCTAAATGTTGGTGTTCTCCACCTAGTACCAACTTTGGAGGTGTTTCCATTATTAGCAGACCCAAAAATGTATGAGCCTAATACTATTGATATCTCAGATCACAGTGAATTAGAGTATTGGCTCACAATTTTGGCAGAGCACTTACCAGATCTTGTGGATAAGGCTGTCGCAAGTGAAGGTGGGACTGATGATGCCAAAAGAAGAGGTGATGCTTTCGCTCGTGCATTTTCTGCCCATCTTGCAAGGTTGATGGAGGAGCCTGCTGCATATGGGAAGTTAGGCTTGGCAAAGCTATTAGAAATGAGGGAAGAGTGCTTGAGAGAATTCCATTTTGTTGATGCCTATATAAGTATAAAGCAAAGGGAAAATGAGGCATCACTTGCTGTTTTACCTGATTTGCTGATGGAGCTTGATAGTCTGGATGAGGAAACAAGACTACTTACTCTAATTGAAGGTGTTCTTGCTGCAAACATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTTTATCATAAAGGAACTATTATTGAAATTTATAGAATGAGTCGCAATAAAATGCAGAGACCTTGGCAGGTGGATGATTTTGATGCCTTTAAAGAGAGAATGCTAGGGAGTGGGGACAAGAAACCGACCCCGCATAGAAGAGCTCTACTTTTTGTGGATAATTCAGGAGCTGACATTGTTCTAGGGATGCTTCCCCTGGCACGGGAGCTTCTTCGTCGTGGAACTGAAGTGGTTCTGGTTGCTAACTCACTTCCTGCTTTAAATGATGTGACTGCAAAAGAGCTTCCCGACATTGTTGCCGAGGCTGCTAAGCACTGTGACATTCTAAGGCGAGCTGCGGAATCAGGAGGCTTGCTTGTGGATGCAATGACTAATACCTTAGACAGTTCTAAAGAAAACTTGTCTACCATTCCCTTGATGGTTGTTGAGAATGGGTGTGGTAGTCCATGTATAGACTTAAGACAGGTCAGCTCTGAGCTGGCTGCAGCTGCTAACGATGCCGATTTGATAATTTTGGAAGGGATGGGTAGAGCTCTTCATACCAACCTCAATGCCCGGTTCAAGTGTGATACCTTGAAGCTTGCAATGGTGAAAAACCAGAGATTGGCTGAAATTTTGGTTAAAGGAAACATATATGACTGTGTTTGCAAGTACGAGCCTGCTAACTGA 2619 0.4227 MGDRGSNINSIHRSSSRPQLDLSKAEIEANIDEDKYPTILLPNQSDHLSHLALDLGGSLIKLVYFSRHEDQSGNDRRMRSVKDRMGLPNRNRRTYRVLGGRLHFLMFETSKINECLDFIHSKKLHCGGSGWESHDYDDVADRNAIIKATGGGAYKFADLFKERLGVSLDKEDEMACMVAGANFLLKAIRHEAFTHMEGQKEFLQIDHNDLYPYLLVNIGSGVSIIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCQSFDELLELSQKGDNRNIDMLVGDIYGGMDYSKIGLSASTIASSFGKATSEKKELEDYRPEDISLSLLRMISYNIGQISHLNAMRFGLKRIFFGGFFIRGHAYTMDAISFAVHFWSKGAAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLKDLDEKISWMEKFLQMGTEITAPVPMALPRTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKMYEPNTIDISDHSELEYWLTILAEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPAAYGKLGLAKLLEMREECLREFHFVDAYISIKQRENEASLAVLPDLLMELDSLDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWQVDDFDAFKERMLGSGDKKPTPHRRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAKELPDIVAEAAKHCDILRRAAESGGLLVDAMTNTLDSSKENLSTIPLMVVENGCGSPCIDLRQVSSELAAAANDADLIILEGMGRALHTNLNARFKCDTLKLAMVKNQRLAEILVKGNIYDCVCKYEPAN* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0833 872 SUPERFAMILY Actin-like ATPase domain 163 396 IPR043129 -
Lan12g0833 872 Gene3D - 275 385 - -
Lan12g0833 872 MobiDBLite consensus disorder prediction 1 20 - -
Lan12g0833 872 PANTHER PANTOTHENATE KINASE 2 9 794 - -
Lan12g0833 872 PANTHER PANTOTHENATE KINASE 9 794 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lan12g0833 872 SUPERFAMILY AF1104-like 488 870 IPR036075 -
Lan12g0833 872 TIGRFAM panK_eukar: pantothenate kinase 50 395 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lan12g0833 872 Pfam Damage-control phosphatase ARMT1-like domain 579 858 IPR002791 -
Lan12g0833 872 Pfam Fumble 50 394 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lan12g0833 872 PIRSF PanK_long 1 872 IPR015844 GO:0004594|GO:0015937
Lan12g0833 872 Gene3D - 508 594 IPR035073 -
Lan12g0833 872 Gene3D - 42 204 - -
Lan12g0833 872 SUPERFAMILY Actin-like ATPase domain 49 191 IPR043129 -
Lan12g0833 872 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 673 870 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0833 Lan-Chr12 15426763 15436419 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0833 K24265 K09680 gmx:100783082 1510.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0833 12 15426763 15436419 Lan15g0637 15 14561808 14583600 PCT
Lan12g0833 12 15426763 15436419 Lan14g0319 14 6232590 6251962 PCT
Lan15g0637 15 14561808 14583600 Lan12g0833 12 15426763 15436419 PCT
Lan14g0319 14 6232590 6251962 Lan12g0833 12 15426763 15436419 PCT