Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0599 ATGTGTATTCAATTTAAAGAGATAGACACAATTTTGTTCGGTGGAACAGCTGTACCAGCAATAATGAAGTGTTTCTCAGTGCCCTTCGTCTCTCTCTGGCTTCTCCTTTCTCTCTGTATTCACAGTGTTTCATCTCAGAACATATCTCTGAGTTCCCTGCAGCAAGCTAGCTTCCCGCCAAGAGGTTGGAATTCCTATGATTCATTTTGCTGGACAATTTCTGAAGAAGAATTCTTGGAGAATGCTGAACTAGTTTCTCAGCGTCTCCGTGCTCATGGATACGAGTATGTTGTGGTGGATTACCTCTGGTATAGAAAGAAAGTCAACGGTTCTTATCCTGATTCTCTTGGATTCGATGTGATTGACGAATGGGGAAGGATGGTCCCTGATCCAGGGAGGTGGCCGTCTTCTGCAGGTGGTAAGGGGTTCACTGAGGTAGCTAATAAAGTACATAGAATGGGTTTGAAGTTTGGGATTCATGTTATGAGAGGGATAAGCACACAAGCATTCAATGCAAACACCGCTATCCTAGATATAACGAAGGGAGGTGCTTATCAAGAATCTGGTCGAGTGTGGCATGCAAAAGACATAGCAATCCCGGAAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTAAATACAAAGTTGGGAGCTGGAAAAGCTTTCTTGCGGTCCCTTTATGAGCAGTATGCTGAGTGGGGCGTTGATTTTGTGAAACATGACTGTGTATTTGGCGATGACTTGGATTTAAATGAAATAACATATGTATCAGAGGTTATCAGGAATCACCCCATTGTGTATTCTCTGTCTCCCGGAACGAGTGTGACACCGGCCATGGCCAAGGATGTCAGTTCACTAGTCAACCTGTATCGTATAACAGGAGATGACTGGGATACTTGGGGTGATGTCAAAGCTCATTTTGGTGTAACGAGGGATTTTGCTACTGCTAATATGATAGGAGGTAAAGGTTTAAAAGGATTCTCCTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCAGGGTCAAATGAAGGTCCACACAGATATAGTAATCTCAATCTGGAAGAAAAACGGACACAGATGACCTTATGGTCTATGGCAAAGTCTCCCCTTATGTATGGAGGGGATGTGCGAAAAATCGATCCTACTACATTTGATCTTATCACGAATCCTACCCTCCTGGAGATTAATCATTTCAGCTCAAATAATATGGAGTTTCCTTATGTCACAAGCTCGGTGAACTCGAAGAGTGAAGATCAACATCATGGAGGGAAAAAGAGAAGACCTAAGAAAGGACCTAAAACACCATTTACAAATTCATTACGTCTCACTGGTTGCACTGAAACAAAGGCAAGTGGTTGGTCTATTGAAAGTCTGAACCGTGATCTTGAAAGAATCTGTTGGAAAAGGAGGCTAGAAAAAAGGCACCAGGCACCATTCTGCGTACACAAGAGAGAACTTCGGTTCAGATTATACAGAGACGGAGAGAGTATATATCAAGAGGGGCATCAAGGGAAGCATCATTTAGTTGATACCAATAGAATGAAATTTTGCTTGGATGCTTCTCCGAAAAGAAAGCTTACTTCTAAAGAGTTCAAGAGAGGTACATTTTCTCCTTGCAGATGGGATGCAAATCAGATGTGGGAGCTAAACCCCAACGGGACCCTGGTAAATAGTTATTCCGGCCTGTGTGCAACAGTAAAATCTGTGAAAGCTTATGTTAATTCTGGAGGGATCAGCTCTTGGATTGCAACAGGAAGAAAAGGAGAAGTGTATGTTGCTTTCTTCAATTTAAGTGAACAGAAGACATTGATATATGCACAGATATCAAATCTGGCTAAGGTTCTTCCTGGAAGAAGCTTCAATTCTTGTAAGGGCAAGGAATTGTGGAGTGGAAAGGACATAGTAACAAAGGAGAAGACATTATCAATAGAAGTGGAAATTCATGGATGTGCACTATTTGTTCTGAATTGCTATTAG 1995 0.4226 MCIQFKEIDTILFGGTAVPAIMKCFSVPFVSLWLLLSLCIHSVSSQNISLSSLQQASFPPRGWNSYDSFCWTISEEEFLENAELVSQRLRAHGYEYVVVDYLWYRKKVNGSYPDSLGFDVIDEWGRMVPDPGRWPSSAGGKGFTEVANKVHRMGLKFGIHVMRGISTQAFNANTAILDITKGGAYQESGRVWHAKDIAIPERACAWMPHGFMSVNTKLGAGKAFLRSLYEQYAEWGVDFVKHDCVFGDDLDLNEITYVSEVIRNHPIVYSLSPGTSVTPAMAKDVSSLVNLYRITGDDWDTWGDVKAHFGVTRDFATANMIGGKGLKGFSWPDLDMLPFGWLTDPGSNEGPHRYSNLNLEEKRTQMTLWSMAKSPLMYGGDVRKIDPTTFDLITNPTLLEINHFSSNNMEFPYVTSSVNSKSEDQHHGGKKRRPKKGPKTPFTNSLRLTGCTETKASGWSIESLNRDLERICWKRRLEKRHQAPFCVHKRELRFRLYRDGESIYQEGHQGKHHLVDTNRMKFCLDASPKRKLTSKEFKRGTFSPCRWDANQMWELNPNGTLVNSYSGLCATVKSVKAYVNSGGISSWIATGRKGEVYVAFFNLSEQKTLIYAQISNLAKVLPGRSFNSCKGKELWSGKDIVTKEKTLSIEVEIHGCALFVLNCY* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0599 664 PRINTS Glycosyl hydrolase family 27 signature 53 72 IPR002241 GO:0004553|GO:0005975
Lan12g0599 664 PRINTS Glycosyl hydrolase family 27 signature 88 103 IPR002241 GO:0004553|GO:0005975
Lan12g0599 664 PRINTS Glycosyl hydrolase family 27 signature 360 381 IPR002241 GO:0004553|GO:0005975
Lan12g0599 664 Gene3D Aldolase class I 50 405 IPR013785 -
Lan12g0599 664 PANTHER ALPHA-GALACTOSIDASE 29 661 - -
Lan12g0599 664 SUPERFAMILY Glycosyl hydrolase domain 577 662 - -
Lan12g0599 664 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 29 661 IPR002241 GO:0004553|GO:0005975
Lan12g0599 664 CDD GH27 59 402 IPR002241 GO:0004553|GO:0005975
Lan12g0599 664 SUPERFAMILY (Trans)glycosidases 56 402 IPR017853 -
Lan12g0599 664 CDD RICIN 550 573 IPR000772 -
Lan12g0599 664 Gene3D - 443 579 - -
Lan12g0599 664 MobiDBLite consensus disorder prediction 417 446 - -
Lan12g0599 664 Pfam Alpha galactosidase A 230 402 IPR002241 GO:0004553|GO:0005975
Lan12g0599 664 Gene3D - 580 663 IPR013780 -
Lan12g0599 664 Pfam Alpha galactosidase C-terminal beta sandwich domain 582 661 IPR041233 -
Lan12g0599 664 SUPERFAMILY Ricin B-like lectins 520 590 IPR035992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0599 Lan-Chr12 12825366 12831509 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0599 20 491 Glycoside Hydrolase AT3G26380 65.190 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0599 - - lang:109362678 1362.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0599 12 12825366 12831509 Lan3g1464 3 26195298 26200834 PCT