Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0235 ATGACACACGACAAACCCATCATAACATACCGTCACATCCCACACCTCAAACCCTCTTCTTACGACGTCGTTTATCACCCCAACTATCGCCAACCTCTCATTAAGCACGCTACCCTCTCTTTCGCCGCCAGTGGCATCACTTGTAAATTCGCATGCGTCTCAGTGGCAGAAAGGAAATTTGACAAGGATTCCATGCCGACAACGTCTCAGCTTATGAAACACCCGCTGGCCGTTGTCGCGCTTGTTCCTAAAGACGCCGCCTTATTCCTTGCCGGAGCTATTGCTGGCGCCGCCGCGAAGACCGTTACTGCTCCGCTCGACCGTATCAAGCTACTCATGCAGACTTATGGTGTGAGAGTTGGGCAAGAGAGTGCCAAGAAGACGATTAGTTTAGTTGAGGCCATTACAGTTATAGGGAAGGAAGAAGGCATTAAAGGTTACTGGAAGGGCAACCTCCCTCAGGTGATTCGGGTTATACCCTACAGTGCCGTTCAGCTTTTTGCTTATGAAATTTATAAGAAAATATTCAGAGGAAAGAATGGTGAACTCTCTGTTGTGGGAAGACTTGCTGCAGGTGCGTTTGCTGGCATGACATCCACTTTTATAACTTATCCATTAGATGTACTAAGATTACGATTAGCTGTTGAACCTGGTTGCCGAAGCATGTCAGAGGTTGCCTTGAGCATGCTAAAAGAGGAAGGATTTGCATCTTTCTACTATGGTCTTGGGCCTTCTCTCATTGGAATAGCTCCTTATATTGCAGTAAACTTTTGTGTTTTTGACTTATTAAAGAAGTCGTTACCAGAGAAGTATCAAAAAAGAACTGAAACATCACTACTCACTGCTGTGCTTTCGGCATCACTTGCTACGCTTACATGCTATCCTCTGGATACTGTGAGAAGACAGATGCAATTGAAGGGTACACCTTATAAGACAGTATTAGATGCCATTTCAGGTATTGTGGCACGGGATGGAGTTATTGGCTTGTATCGCGGATTTGTGCCCAATGCTTTAAAAAATCTACCAAACAGCAGCATCAGGCTTACCACATATGACTTTGTTAAACGCCTAATTGCAACAAGTGAGAAAGAGTTTCAAACAATTACAGAAGAAAACCGCAACAAACAAAAATAA 1134 0.4427 MTHDKPIITYRHIPHLKPSSYDVVYHPNYRQPLIKHATLSFAASGITCKFACVSVAERKFDKDSMPTTSQLMKHPLAVVALVPKDAALFLAGAIAGAAAKTVTAPLDRIKLLMQTYGVRVGQESAKKTISLVEAITVIGKEEGIKGYWKGNLPQVIRVIPYSAVQLFAYEIYKKIFRGKNGELSVVGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGCRSMSEVALSMLKEEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLLTAVLSASLATLTCYPLDTVRRQMQLKGTPYKTVLDAISGIVARDGVIGLYRGFVPNALKNLPNSSIRLTTYDFVKRLIATSEKEFQTITEENRNKQK* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0235 377 Gene3D Mitochondrial carrier domain 85 358 IPR023395 -
Lan12g0235 377 PRINTS Mitochondrial carrier protein signature 88 101 IPR002067 GO:0055085
Lan12g0235 377 PRINTS Mitochondrial carrier protein signature 101 115 IPR002067 GO:0055085
Lan12g0235 377 PRINTS Mitochondrial carrier protein signature 150 170 IPR002067 GO:0055085
Lan12g0235 377 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Lan12g0235 377 PRINTS Mitochondrial carrier protein signature 239 257 IPR002067 GO:0055085
Lan12g0235 377 PRINTS Mitochondrial carrier protein signature 282 304 IPR002067 GO:0055085
Lan12g0235 377 Coils Coil 358 377 - -
Lan12g0235 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 357 IPR018108 -
Lan12g0235 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 83 175 IPR018108 -
Lan12g0235 377 PANTHER SOLUTE CARRIER FAMILY 25 5 369 - -
Lan12g0235 377 PANTHER ADP/ATP CARRIER PROTEIN 5 369 - -
Lan12g0235 377 SUPERFAMILY Mitochondrial carrier 86 354 IPR023395 -
Lan12g0235 377 Pfam Mitochondrial carrier protein 277 360 IPR018108 -
Lan12g0235 377 Pfam Mitochondrial carrier protein 88 179 IPR018108 -
Lan12g0235 377 Pfam Mitochondrial carrier protein 182 269 IPR018108 -
Lan12g0235 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 183 266 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0235 Lan-Chr12 4947498 4953310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0235 1 377 Organic Solute Cotransporters AT3G51870 66.580 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0235 K14684 - gmx:100796878 571.622