Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0230 ATGGCTTGTCAAGAATGGCCAGAGCCAGTGATACGAGTCCAAACCTTATCTGAGAGTGGCATAACCTCAATCCCTAAACGTTTCATCAAACCTCAGTTCCAAAGACCCACCAAAACCATTGCTTCACCGAACAAAACTTCTCCAAACGTTGATAATATCTATATCCCAGTCATCGATATGCAACACCTTTATGGTGGGGACAAGAAGCTAAGGGAGGAAACACTTCAGCACATTTCAGATGCATGTAAGGGATGGGGTTTCTTCCAAGTGGTTAACCATGGTGTTAGTCATGAATTGATGAATTGTGCTAGGGAAGTGTGGCGTGAGTTCTTTCACCAAACACTTGAGGTGAAGGAAGTGTATGCTAATTCACCTAGTACTTATGAGGGATATGGTAGTCGTTTGGGAGTGAAAAAAGGTGCCATTTTGGATTGGAGTGACTATTTCTTTCTCCATTACATGCCTTCTTCACTTAAGGACCAAGCCAAATGGCCTACCCTCCCAACATCTTTGAGGAATGTGATCGATGAATATGGTGCGGAAGTGGTTAAGCTAGGAGGAAGAATACTTGAGATCATGTCAATAAATCTTGGTCTAAGAGAGGATTTCCTTCTAAACGCATTTGGTGGAGAAAGTGATCTTGGTGCTTGTTTAAGGACAAATTTCTATCCAAAGTGTCCACAACCTGACCTTACTCTTGGCCTCTCCCCTCATTCTGATCCTGGTGGTATGACTATTCTTCTCCCAGATGATTATGTGTCTGGACTTCAAGTGCGAAGAGGAGAAGATTGGGTCACTGTTAAGCATGTCCCAAGTGCTTTCATCATCAATATTGGTGACCAAATTCAGGTGCTGAGCAATGCAATATACAAGAGTGTTGAACACAGGGTGATTGTGAATTCAAATAAAGATAGAGTTTCATTGGCTTTCTTTTATAACCCTAGGAGTGATTTGCTGATTCAACCTGCTAAGGAGCTAGTGACCAAGGACAGGCCAGCACTTTACCCTCCAAGGACATATGATGAATATAGACATTACATTAGGACAAAAGGACCCGCTGGGAAAGCCCAATTAGTTGAATCTTCAACTTCTCAAACGTGA 1101 0.4242 MACQEWPEPVIRVQTLSESGITSIPKRFIKPQFQRPTKTIASPNKTSPNVDNIYIPVIDMQHLYGGDKKLREETLQHISDACKGWGFFQVVNHGVSHELMNCAREVWREFFHQTLEVKEVYANSPSTYEGYGSRLGVKKGAILDWSDYFFLHYMPSSLKDQAKWPTLPTSLRNVIDEYGAEVVKLGGRILEIMSINLGLREDFLLNAFGGESDLGACLRTNFYPKCPQPDLTLGLSPHSDPGGMTILLPDDYVSGLQVRRGEDWVTVKHVPSAFIINIGDQIQVLSNAIYKSVEHRVIVNSNKDRVSLAFFYNPRSDLLIQPAKELVTKDRPALYPPRTYDEYRHYIRTKGPAGKAQLVESSTSQT* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0230 366 Gene3D - 8 350 IPR027443 -
Lan12g0230 366 Pfam 2OG-Fe(II) oxygenase superfamily 216 314 IPR044861 -
Lan12g0230 366 PRINTS Isopenicillin N synthase signature 78 95 - -
Lan12g0230 366 PRINTS Isopenicillin N synthase signature 274 300 - -
Lan12g0230 366 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE 3 354 - -
Lan12g0230 366 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 354 - -
Lan12g0230 366 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 213 314 IPR005123 -
Lan12g0230 366 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 165 IPR026992 -
Lan12g0230 366 SUPERFAMILY Clavaminate synthase-like 9 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0230 Lan-Chr12 4687533 4691846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0230 13 358 Glycosyltransferase AT5G59530 33.428 4.97e-52 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0230 - - gmx:100809662 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0230 12 4687533 4691846 Lan12g0230 12 4687533 4691846 ECH