Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0188 ATGTGGAGGTACATTAATGGAAGAACTGCCAGAAGATTTCTATCCACTTCTGCCACTGCCCGTGGCTGGTGGAATCATGTAAGACCAGCACCGAAAGACCCCATTGTTAGTGTAAATGAAGCTTTTCTTGCTGACCCTTTTCCCCTCAAGATTCATCTTGGTGTGGGGACTTATAGAGATGATGATGGCAAACCTTTGATTCCTCATTGCGTTCGTGACGCGGAAGCAAAGATTGAGAGATGTAAATTGGAGAACTTAAACTCTTCTGCAGTCACTTCAAAATTTGTTCTGGAGAGTGTAAAGTTGGCATATGGGAATGATTCATATGTAGTAAGAGAAGGATTGTTTGCTGGAATTCCAGCTTTGTCTGGAACCGGTGCATGTCGCCTTTTTGCTGAATTCCAAAGGCATTTCTATCCTGATTCACAAATTTATCTACCAGATCCAACCTGGTCAAATCACCACAACATATGGGGACAAGCTGAAATTCCTATCAAAACCTTCCACTACTACAATCGAGATACCAAGGGATTAGACTTTGCTGCACTCATTAATGATGTCAAGAATGCACCAGATTGTTCTTTCTTCTTGCTCCATCCATGCGCTCATAACCCAACCGGTGTTGATCCTACTGAGGAACAATGGAGGGAGATATCATACCAGTTCAAGGTAAAAAACCACTTTCCCTTCTTCGACATGGCTTATCAAGGTTTTTCAACCGGGGATCTTGACAAGGATGCCGTAGCACTTCGAATATTCCTTGAAGATGGACATTTAATAGGTTGTGCTCAAACATTTGCAAAGAATATGGGATTATTTGGGCATAAAGTTGGTTGTCTAAGTGTTTTGTGTCAGGATATAAAGCAAGCATCTGCAGTCAAAAGCCAACTACAAAAAATTGCCCATTCAATGTATAGCAGCCCTCACATTCATGGTATCTTACTAGTTACTATGATCTTGAGTGACCCAGATATGAAAGCACTTTGGAGGAAAGAGATTAATGTAATGGCAAAACGGATTCAAACAATGCGATCTAGTCTGCGCCAAAGTCTTGAGACCTTGGATTCATCTTTCAATTGGGAGCATATAACTACCCAGGGTGGCATGTTCTGCTTTTCTGGACTAACCCCGGATCAGGTTAAACTCCTGGAGAAGATATTCCATATATACATGACTCCTGATGGACGAATAAGCATGGCAGCTGTGACAACAAGCAATGTCAAGTATTTGGCAAATGCAATACATCAAGTGACCAGAATTGATGAAGAAGCATTGACTGCATGTAACAATAGGTTTTGA 1299 0.4142 MWRYINGRTARRFLSTSATARGWWNHVRPAPKDPIVSVNEAFLADPFPLKIHLGVGTYRDDDGKPLIPHCVRDAEAKIERCKLENLNSSAVTSKFVLESVKLAYGNDSYVVREGLFAGIPALSGTGACRLFAEFQRHFYPDSQIYLPDPTWSNHHNIWGQAEIPIKTFHYYNRDTKGLDFAALINDVKNAPDCSFFLLHPCAHNPTGVDPTEEQWREISYQFKVKNHFPFFDMAYQGFSTGDLDKDAVALRIFLEDGHLIGCAQTFAKNMGLFGHKVGCLSVLCQDIKQASAVKSQLQKIAHSMYSSPHIHGILLVTMILSDPDMKALWRKEINVMAKRIQTMRSSLRQSLETLDSSFNWEHITTQGGMFCFSGLTPDQVKLLEKIFHIYMTPDGRISMAAVTTSNVKYLANAIHQVTRIDEEALTACNNRF* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0188 432 Pfam Aminotransferase class I and II 50 414 IPR004839 GO:0009058|GO:0030170
Lan12g0188 432 Gene3D Aspartate Aminotransferase, domain 1 27 414 IPR015422 GO:0003824
Lan12g0188 432 Gene3D - 81 322 IPR015421 GO:0003824
Lan12g0188 432 PRINTS Aspartate aminotransferase signature 196 215 IPR000796 GO:0006520|GO:0008483
Lan12g0188 432 PRINTS Aspartate aminotransferase signature 227 239 IPR000796 GO:0006520|GO:0008483
Lan12g0188 432 PRINTS Aspartate aminotransferase signature 295 320 IPR000796 GO:0006520|GO:0008483
Lan12g0188 432 PRINTS Aspartate aminotransferase signature 363 381 IPR000796 GO:0006520|GO:0008483
Lan12g0188 432 CDD AAT_like 127 416 - -
Lan12g0188 432 PANTHER ASPARTATE AMINOTRANSFERASE 12 422 - -
Lan12g0188 432 PANTHER ASPARTATE AMINOTRANSFERASE 12 422 IPR000796 GO:0006520|GO:0008483
Lan12g0188 432 SUPERFAMILY PLP-dependent transferases 23 419 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0188 Lan-Chr12 3058391 3062740 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0188 K14455 - gmx:100814593 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0188 12 3058391 3062740 Lan12g0188 12 3058391 3062740 ECH