Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0179 ATGGAAGAGCATGTAGCAGCTTTGCATACTGCTACGAATGCTTTGCAAGCATTAGGAAGAGGATTTGATTTGAATTTTGATACAAGGTTGCTGTATTGCAAAGGAGTTTCAGGGTCTCGAGTAGTTGAGATTGATGAAGAGCACCCTAGGGAACTGTTTTTGTACGATGATGTAGTTATTCCCAATGTTTCCAGGGACATTAGGAACTTTCCGGAGCCCGAAGGGCGTCAGAGTTCTGGGGTCTGCACTTTCCAAGAGATGGTGGAATATTTTAATCATAAGGCAAATGTATCCGGGAGCTTTGCTCTTGGGAGCTTTAACTCTGCATTTAGCTTCACTGGTTCAAAACATGTTGATGCTGCAGCCACAAAAACCTTGTCTAAGGATGGGTTTTACGTTCCCCTTGCAAAGATTGAGCTTATGAAATCCCAATTAATGTTGCAAGAAAATGTCAAAAGGGCTGTCCCGGTCTATTGGGATCCACCATCATTGGCAAGCTTCATTGAAAATTTTGGGACGCATGTCATTACATCAATAACTATTGGTGGTAAAGATGTTATTTACATTAAACAACACCATACTTCACCATTATCGAAGTCAGAGATAAAGAACTACATTGAGGATATTGGAAATCAGAGGTTTGCTGATATCGATAGCCAGACAAGTTCAGGTCAAACAAAATCCAAGGATAAGGGTGTTGAGCCTTTTTCATTCAATAGTCAAGGGATTTACCCTCAACCTACAACTGCAACATATCCTACTGGGAAAGAAGATGTCACAGTCATTTTCAGAAGAAGGGGGGGAGATGATTTGGAACAAAACCACAGTAAATGGGTAAGAACTATCAAGTCCTCTCCAGATATTATTGAGATGACTTTCTGTCCAATAACAGATCTTCTGGGTGAAAGACCCTGCAAGGAGCATTTGACTCGTGCTATTGGTCTTTATCTTGAATATAAACCTCCGATTGAAGAACTTCGATATTTCCTAGAGTTTCAGATTCCTCGCATTTGGGCTCCTATACAGGACAGGATTCCTGGTCACCAAAGGAAGGAACCTGTGTGCCCATCTTTGCAATTCAGCATAATGGGCCAAAAACTTTACGTCAGCCAAGAACAGATTACAGTTGGACGTAGACCTGTAACTGGCTTACGTCTTTGTTTAGAAGGAAGCAAGCAGAATCGCCTGAGTGTTCATCTGCAACATTTAGTATCCCTTCCGAAGATTCTTCAGCCGTATTGGGAAAGCCATGTAGCTATCGGTGCTCCCAAGTGGCAGGGACCCGAGGAACAAGATAGCCGGTGGTTTGAGCCTCTTAAATGGAAGAACTTTTCTCATGTGAGTACCGCACCAATTGAGAACCCTGAAACATTTATAGGAGACTTCTCTGGTGTCTACATAGTTACTGGAGCACAGCTTGGAGTGTGGGATTTCGGATTACGGAATGTATTGTACATGAAGCTCTTGTATTCTAGGTTACCTGGCTGCACGGTCCGAAGATCACTGTGGGATCACACCCCAATCAAGTCACCGAAAATCATCCCTGCTGGCAACACTTCCAATCCAGACGAGTCAAGCACTGGTTCTAGAGAAAACGTAATGGCGAACAAGTTGGTGAAGTTTGTCGACTTGTCTGAGATGAGCAAAGGACCGCAAGATCCTCCGGGCCATTGGTTAGTTACTGGAGGAAAGCTGGGTGTTGAGAAAGGGAAAATTGTTTTGAGAGTGAAATATTCCTTGCTAAATTACTGA 1752 0.4304 MEEHVAALHTATNALQALGRGFDLNFDTRLLYCKGVSGSRVVEIDEEHPRELFLYDDVVIPNVSRDIRNFPEPEGRQSSGVCTFQEMVEYFNHKANVSGSFALGSFNSAFSFTGSKHVDAAATKTLSKDGFYVPLAKIELMKSQLMLQENVKRAVPVYWDPPSLASFIENFGTHVITSITIGGKDVIYIKQHHTSPLSKSEIKNYIEDIGNQRFADIDSQTSSGQTKSKDKGVEPFSFNSQGIYPQPTTATYPTGKEDVTVIFRRRGGDDLEQNHSKWVRTIKSSPDIIEMTFCPITDLLGERPCKEHLTRAIGLYLEYKPPIEELRYFLEFQIPRIWAPIQDRIPGHQRKEPVCPSLQFSIMGQKLYVSQEQITVGRRPVTGLRLCLEGSKQNRLSVHLQHLVSLPKILQPYWESHVAIGAPKWQGPEEQDSRWFEPLKWKNFSHVSTAPIENPETFIGDFSGVYIVTGAQLGVWDFGLRNVLYMKLLYSRLPGCTVRRSLWDHTPIKSPKIIPAGNTSNPDESSTGSRENVMANKLVKFVDLSEMSKGPQDPPGHWLVTGGKLGVEKGKIVLRVKYSLLNY* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0179 583 MobiDBLite consensus disorder prediction 216 250 - -
Lan12g0179 583 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 330 IPR020864 -
Lan12g0179 583 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 6 583 IPR044663 GO:0006952|GO:0012501|GO:2000031
Lan12g0179 583 Pfam MAC/Perforin domain 104 316 IPR020864 -
Lan12g0179 583 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1-LIKE 6 583 - -
Lan12g0179 583 SMART MACPF_8 123 318 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0179 Lan-Chr12 2638189 2644588 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0179 - - aprc:113849343 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0179 12 2638189 2644588 Lan12g0179 12 2638189 2644588 ECH
Lan12g0179 12 2638189 2644588 Lan1g0713 1 16220085 16227280 LSH