Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0170 ATGGCTCACCATCAACTCATCGACTCGCTCACTTCTCACATTTCTCTTTATCATTCTTCCAATTCAATTTCCCAATCCTCTAACCCTAACCCTAACCCTAACCCACGATCTTCAATTCTCAAATGGTTCTCTTCCCTCACGATCCACCAGCGCCAATCTCATCTCACCATAATTGATCCAACCTTCGTTCAAATCCTTCTCCAAATGCTCTCTAAGCTTCGCGCTAGTGGCCATGGACGATTCATCCTTCTCCCTGATCTCCCCTCGCGGGACCCACCTTTCTTACCTACGCTGTGTTTCAAGAGGTCTATTGGACTTCTGTCGCGTGTCGCCGACTCGGATGAATCCGGGCGGTGGCTGTTTGACTCCGCCCGGCTGTTCGAGTCGGCGGAAGGGGAGAGTGTTGAGGCCTGCTCGTGCTCTGCGAGAGGCCTTGATGGGTTAACGCTGGCTGAGGATTTTTTGGAGAGTGTGGATCGGTTTGTGGAGGTGATGGATGGGATTTCGAATGGTGCGTTTTTGAGAGGGGATGATAGTGATCTTGGGGAGGATTGTGTGGAGCTGCATTGGCTGAAATCGAAGGGATATTATGGGATTGAGGCATTTATCGCGAACAGGATCGAGGTTTCGATGAGGTTGGCTTGGTTGAATAGTAGTGGTGGGAGAAAGAGAGGTGTTAAATTGAAGGAGAAGTTGAACGGAGCGGGTGTCTCGATGAATGTGTTTTGGAGGAAGAAGGGTTGTGTGGACTGGTGGGTGAATCTGGACGCTGCCACGAGGAAGAAGGTCTTGACTACCATCATGAGTAAAGCTGCAAAAAATTTGACTCGTGAGGTTTTGGAAGTGGCAAGTAGTGCCTCTGGGGATGAGGTCTGGCTATACAGTGTGGGAGTTGATAAATTAAAGCAATACAGCCGCCCTGCATCAGCTCAAAGGACTATGCGAACGTTTCGTGATGATGTCGAATTTGGATCAGTTGTTACACCAATCAACTTTATTAAAAAACCTGCTGGTTTAGCCAGGGCCTTTAATTCGTTAGTTGTGCTTCAGGACATTAATAAAATTATAACATCATGTCTTAATAGTGAATATGATGCAGGAAAGCTATTTTTTAGTTCGTTGGGTTCTGTTTGTACGATATCTGATTGTATATTACGAAAAATGCGAGGATTTCTGATGGTTATTTCACTTGATTGCACAAAACTTGAACTTTTAGATGAGGAAGTTGACAAGTCTTCAGGTAAACCTAAAGAAAAGCCTGGTATTTGTAACCGCAAAAAGAAGGGACGGACTCGCAATACTAAAAGGCAAAATCCTGTCCCAAAGATATGTATGGATGGCATTTCACGTGAAAATCCACCTAAGGACATTGATTATTTAGTGGATAATAAAATGAAAGATGATTTAGCGGCATCCGGGGAACTTCCTGATGTTCCTTTAGGGAAAGAGATTGCTATGAGAAGCTCATCATCAACTATAAAAATGGATCCAACTCGGGGATTGGGCACTGCTAAACTTCAGACTACTTCAAGAAGAAGTAGAAAACAAAAAACTAAAAGTAAAAACATCCTTGTTTCCAGTGAGGTTGGAGATTCTCAAAAATCAATTATGGATTTTGTCTCTACCACTGCTCTTCCTGAAGGTGAGGTGGCAATAAGTGACAGGCATTTTGATAGTTCTACCATTCAGTACATAAAAAATGACAATTCAATTGATAATGACATCCTTGCATCAAATTCAAACCTCTGTACTTCTCTTAGTGGGCCTACTAAGGAGACCAGTTCTACCCGAAAAGTTGAAGGAGAGAATGTTGAAGATCTTCCTGAAAGTTTAGGTCCTCAATTTTGCTTATTGTCAAATGAAAGGAAAACTCTGTCTTCAGGAATAGATAGTTTAACTTGTGATGCTGATAATAATAAAGTAACTCCTGCACCTGCATTGATGCGTGGTGCTCTCTTCATCAATGAAGATTCTAGTCCTGTGAACTCAATATGTGCAGCTGAAGCTGGTGCAAAGTCAACTGTTCCTGACAAACCAATCAGAGAGGTTCACGTGAAAGAATCCGCGGTGTTGATGGGGCAAGATAGATGTCAATTTGAAAGTAGAAATTCAGCCTTGACAAAATGCATTCCATATGAGTGGCCTGGTGTACCTTCTATCTATTTTCCATCTATTAACTCACACCTTCCTCCTGCTACTGATAGATTGCATCTGGATGCTGGGCGCCATTGGCATAATCACTTCTGTCACTCATTTGTTCCCACATTACAACAAGCAAGAAATACTCCAATTGAAGGTGGATGTAACCGAATTCTGTCTCAATCAATTCCTATGAGTTTAGACTGGCCCCCAGTTTTTCATGGTGGCATGGCTCCATCACCGAACTGTAATTATGACTCTGGTTTTATCTCCAGGCGGCAGTGTACCTTTTCAAAAGGGCTGGCTGTTCACAATGTGCAAGTTGATGCAACAACTCCTGATGATGAAAGAAAGTATTCTGGGGATATATTTGATTTACCCGATCTAACAAATGCACAGGAGCTAGCAGATGAATTTGAAAATCACTGGGTATCAGAGGAAGAGTATGAGGTTCATGCTGTTTCTGGTTTAGATTGTAATCAATATTTTGGTGGTGGCATAATGTACTGGAATCCTTCTGATTATCGAGGAACAGGTTTCTCCCGTCCTCCCTCTCTTAGCTCTGATGACAGTTTGTGGGCTTTGCGTGAAGCTGACATGACTAGGACAGTGGATGACATGGTTGCTTTTTCATCTTCATATAGTACAAATGGGTTGACTTCACCCACTGCCGCTACATTTTGTTCTCCATTTGATCCCGCAGGAACAGGGCCCCAGACTGTCAGTTATGTGATGTCAGGTAATGAAGTATCTGGAAAGGTATTGCATTCTTCATCAGTTACAGATGCAGGATTGGATGAGGATGCTTCTGGTTCTTTGGGCAGTAATTTAGCTGGAGATGTTGAAGGGAAGGGAAGCGATTCACATCCGTACCCTATTTTACGGCCAATAATTATTCCTAGCTTGTCAAGGGACAGGTCAAGATCTGACTTTAAGCGTAGTGTTGACCATAAAAGCCCTTGTGTTCCTCCTACCAGGCGGGAGCAGCCTCGCATAAAACGGCCACCATCACCTGTAGTGCTGTGTGTTCCACGGGCTCCACGTCCACCCCCTCCCTCCCCTGTCAGTGACTCCAGGAAACAAAGGGGTTTTCCAACAGTTAGATCTGGTAGTTCCAGCCCGAGGCACTGGGGAATGAGGGGCTGGTATCATGACGGAAGTAATATGGAAGAAGCTTGTTTAAGAATGGAGGGTGCCGAAGTTGTATGGCCTTCTTGGAGAGGTAATAACCTTAAAGTGCGACCTATGGTTCAGCCTTTACCTGCTGCCTTGCTGCAAGACCGCCTGATTGCAATGTCACAAATAGCACGTGACCAGGAACACCCTGATGTCACCATTCCTTTGCAACCTCCCGAATTACAAAGCTTTTCTTCACAGAGTGCGTCTTTATCTTTGATGCATGGCCTTCTCCATGATGAGATTGACTCTTTCTGTAAACAGGTTGCTGCAGAAAATATGGCCAGGAGACCTTACATCAATTGGGCTGTCAAGAGAGTTACCCGATCTCTTCAGGTTCTTTGGCCCAGATCTAGGACTAACATATTTGGTTCAAATGCAACTGGTATGTCTCTTCCAACAAGTGATGTTGACCTTGTTGTTTGTCTCCCTCCAGTGAGGAACCTGGAACCTATTAAAGAAGCTGGAATACTGGAAGGTCGGAATGGTATTAAAGAAACATGTCTTCAGCATGCAGCTAGGTATCTTGCCAATCAGGATTGGGTAAAAAGTGATTCTCTGAAAACGGTGGAAAATACAGCTATACCTATTATTATGCTCGTGGTGGAAGTACCACAGGATGTTATCACTTCTTTGGCTCCTATGGTACAATCACTAAAAGAAGAGCCACATAGTACTCCTGGCAGACATGGTAATGAAAGTCATTCTGATATTATCCAATTAGAAGATCCATCTTTCCCAAAAAGCTCCCAAATAAATTCTGATGCCCCAAAAGATTCCAAATCAGTTCGTCTTGACATCAGCTTTAAGTCCCCATCACATACAGGACTCCAAACTACAGAAATGGTTAAGGAGTTGACGGGACAATTTCCTGCTGCTACTCCTCTTGCTTTGGTACTAAAACAGTTTTTGGCAGATCGTAGCCTTGATCAGTCCTATTCTGGTGGCTTAAGTTCCTACTGTTTGGTGTTATTGATCATACGTTTTCTTCAGCATGAGCACCATCTTGGCCGACCAATCAACCAAAACTATGGAAGTCTTCTGATGGATTTTCTTTACTTCTTTGGGAATGTATTTGATCCTCGCCAAATGCGGATATCAGTGCAGGGGAGTGGACTTTATATCAAAAGAGAAAGAGGTTGTAGCATCGATCCAATACACATTGATGATCCTCTTTTCCCAACAAATAATGTGGGAAGGAATTGCTTCCGAATACATCAATGTATTAAGGCCTTTTCAGAAGCTTATTCTGTTCTTGAAAACGAACTTGCATTCCCAAATAGTGATGCTGAGTCAAGTTCAAGGCCACCTTACAGACTGCTTCCAAAAATCATCCCAAATCTCGATGTATCATAA 4671 0.4337 MAHHQLIDSLTSHISLYHSSNSISQSSNPNPNPNPRSSILKWFSSLTIHQRQSHLTIIDPTFVQILLQMLSKLRASGHGRFILLPDLPSRDPPFLPTLCFKRSIGLLSRVADSDESGRWLFDSARLFESAEGESVEACSCSARGLDGLTLAEDFLESVDRFVEVMDGISNGAFLRGDDSDLGEDCVELHWLKSKGYYGIEAFIANRIEVSMRLAWLNSSGGRKRGVKLKEKLNGAGVSMNVFWRKKGCVDWWVNLDAATRKKVLTTIMSKAAKNLTREVLEVASSASGDEVWLYSVGVDKLKQYSRPASAQRTMRTFRDDVEFGSVVTPINFIKKPAGLARAFNSLVVLQDINKIITSCLNSEYDAGKLFFSSLGSVCTISDCILRKMRGFLMVISLDCTKLELLDEEVDKSSGKPKEKPGICNRKKKGRTRNTKRQNPVPKICMDGISRENPPKDIDYLVDNKMKDDLAASGELPDVPLGKEIAMRSSSSTIKMDPTRGLGTAKLQTTSRRSRKQKTKSKNILVSSEVGDSQKSIMDFVSTTALPEGEVAISDRHFDSSTIQYIKNDNSIDNDILASNSNLCTSLSGPTKETSSTRKVEGENVEDLPESLGPQFCLLSNERKTLSSGIDSLTCDADNNKVTPAPALMRGALFINEDSSPVNSICAAEAGAKSTVPDKPIREVHVKESAVLMGQDRCQFESRNSALTKCIPYEWPGVPSIYFPSINSHLPPATDRLHLDAGRHWHNHFCHSFVPTLQQARNTPIEGGCNRILSQSIPMSLDWPPVFHGGMAPSPNCNYDSGFISRRQCTFSKGLAVHNVQVDATTPDDERKYSGDIFDLPDLTNAQELADEFENHWVSEEEYEVHAVSGLDCNQYFGGGIMYWNPSDYRGTGFSRPPSLSSDDSLWALREADMTRTVDDMVAFSSSYSTNGLTSPTAATFCSPFDPAGTGPQTVSYVMSGNEVSGKVLHSSSVTDAGLDEDASGSLGSNLAGDVEGKGSDSHPYPILRPIIIPSLSRDRSRSDFKRSVDHKSPCVPPTRREQPRIKRPPSPVVLCVPRAPRPPPPSPVSDSRKQRGFPTVRSGSSSPRHWGMRGWYHDGSNMEEACLRMEGAEVVWPSWRGNNLKVRPMVQPLPAALLQDRLIAMSQIARDQEHPDVTIPLQPPELQSFSSQSASLSLMHGLLHDEIDSFCKQVAAENMARRPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGMSLPTSDVDLVVCLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVKSDSLKTVENTAIPIIMLVVEVPQDVITSLAPMVQSLKEEPHSTPGRHGNESHSDIIQLEDPSFPKSSQINSDAPKDSKSVRLDISFKSPSHTGLQTTEMVKELTGQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSGLYIKRERGCSIDPIHIDDPLFPTNNVGRNCFRIHQCIKAFSEAYSVLENELAFPNSDAESSSRPPYRLLPKIIPNLDVS* 1557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0170 1556 SUPERFAMILY Nucleotidyltransferase 1185 1390 IPR043519 -
Lan12g0170 1556 MobiDBLite consensus disorder prediction 1018 1086 - -
Lan12g0170 1556 MobiDBLite consensus disorder prediction 1053 1069 - -
Lan12g0170 1556 PANTHER POLY(A) RNA POLYMERASE 663 1552 IPR045862 GO:0004652|GO:0031499|GO:0043631
Lan12g0170 1556 MobiDBLite consensus disorder prediction 975 1002 - -
Lan12g0170 1556 Gene3D Beta Polymerase, domain 2 1197 1314 IPR043519 -
Lan12g0170 1556 MobiDBLite consensus disorder prediction 1018 1046 - -
Lan12g0170 1556 MobiDBLite consensus disorder prediction 409 448 - -
Lan12g0170 1556 MobiDBLite consensus disorder prediction 1072 1086 - -
Lan12g0170 1556 Pfam Nucleotidyltransferase domain 1210 1253 IPR002934 GO:0016779
Lan12g0170 1556 MobiDBLite consensus disorder prediction 586 605 - -
Lan12g0170 1556 MobiDBLite consensus disorder prediction 1348 1368 - -
Lan12g0170 1556 PANTHER NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN 663 1552 - -
Lan12g0170 1556 MobiDBLite consensus disorder prediction 421 435 - -
Lan12g0170 1556 Gene3D - 1354 1550 - -
Lan12g0170 1556 MobiDBLite consensus disorder prediction 1348 1363 - -
Lan12g0170 1556 SUPERFAMILY PAP/OAS1 substrate-binding domain 1396 1529 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0170 - - mtr:MTR_4g027425 2203.33