Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0166 ATGAGTTCCGGCGACCTTCTTCACATAAACCCTCAGGAGCTGCAGTTTCCTTTTGAGTTAAGGAAGCAAATCTCATGTTCTTTGCAGTTGTCTAACCAGACAGATAAATATGTGGCTTTCAAGGTTAAGACAACAAATCCTAAGAAGTATTGTGTTAGACCTAACTCAGGAGTTGTGTTGCCAAGGTCTACATGTGATGTTATAGTTACAATGCAAGCCCAAAAGGAGGCACCTCCTGACATGCAATGCAAGGATAAGTTTCTCCTTCAAGGTGTAGTTGCAAGCCCTGGAGTAACCACAAAAGATGTCACTCCAGAAATGTTCAATAAAGAATCTGGCCATGATGTCGAAGAATGCAAATTGAGAGTTGTTTATGTTCCTCCTCCTCGACCACCATCCCCAGTTCAAGAAGAATCTGACGAAGATTCTTCACCTCACGCTTCCGTATCAGAAAATGGGCATTCAATTACCTCAGAATTTACAGCTGCTTCAAAAGCTTTTAGTGAACGGGTTGGACACCAGGATACTTCATTTGAGGCACGATCTCTTATTTCAAAGGTGACTGAGGAGAGGAATTCTGTTATTGATCAAAATAAAAGGCTTCGACAAGAAGTGGAGCTTTTAAGGCGCGAAGCCAACAGAAGCAGTGGCGGCATACCGTTTATATATGTTATCCTTGTCGGCTTGGTTGGCATCATCTTGGGTTTCCTATTGAAGAGGACCAATCACCAGCTTCTCCAAAATGAGCAATTGTAG 756 0.4259 MSSGDLLHINPQELQFPFELRKQISCSLQLSNQTDKYVAFKVKTTNPKKYCVRPNSGVVLPRSTCDVIVTMQAQKEAPPDMQCKDKFLLQGVVASPGVTTKDVTPEMFNKESGHDVEECKLRVVYVPPPRPPSPVQEESDEDSSPHASVSENGHSITSEFTAASKAFSERVGHQDTSFEARSLISKVTEERNSVIDQNKRLRQEVELLRREANRSSGGIPFIYVILVGLVGIILGFLLKRTNHQLLQNEQL* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0166 251 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Lan12g0166 251 MobiDBLite consensus disorder prediction 126 154 - -
Lan12g0166 251 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Lan12g0166 251 Gene3D Immunoglobulins 2 129 IPR013783 -
Lan12g0166 251 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 1 239 IPR016763 GO:0005789
Lan12g0166 251 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 1 239 - -
Lan12g0166 251 Coils Coil 184 211 - -
Lan12g0166 251 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Lan12g0166 251 SUPERFAMILY PapD-like 2 140 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0166 Lan-Chr12 2277648 2280792 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0166 - - lang:109362704 465.307