Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0133 ATGACTCTTGTTATTGAATCCCTTTCACCCATTACTATGGGCACTTTTTCCAACACAGCTTCGAAGCAGATTCGATTTCTGCTCAATTCCTTGAACCAGCTCAACTTTGACTCTGTTTTTCATCAACTCATTCAGTTCACTGAATTTGGCACTGTTGGGAGCATTTTGCTGCTTCAAACATGCTTGGATCATTTCAACTTTGCCAGAAGAGATATGAAAGACATTCAGCCCGAGAGAATTCTTGTCGATGTTGTCAAGTACCTCTTGGACAAACCTAACTTCAATGCAGTTTTTTCTGAGTCTGTGAAGAATGTGGAAATCAATGAAAGCTTTTTAGAAAGTTTTTGTAATGGATTGGAGTTGTCTTTAATGGAAAAAATTGCCATCAGTCTTTCTTTATCTGATTCTGAAAACCCCGATGCCAAGCTTTGCGGCAAGAGCTTTTGCATAGCTCAGATTGAGAAATTGTGTGCCAATCCTGGTTCTTTGAATTGCTATGAGCTAATTCATGATATTATCATGTTCCTCAAGCAGTCTGAGGGTCTTTCCAAGTATGTAGATTCCTTTATGCAGATATTATCGCTGGTGCAGTTCAAGGACACACCGTCTTTTGTTTTGAATCCATTGCTTCCTGATGAGATGCGCGAGGCTGAGTTTTTAAGGAATATGGAGCTGTTCCATGCGAGTGGAGATAATGATTTTGATGCTATTTTGGCCGACATCGAGAAGGAAATGAACATGGGAGAGATTGTGAATGAATTAGGCTATGGATGTACAGTTGATGTCTCACAGTGCAAGGAAATCTTTTCGCTCTTCACACCTTTAACTGAAAGCAACCTCTCTAAATTACTTGGTTCTATTGCTCGTACCCATGCTGGGCTGGAGGACAACCAGAGCACATTCTTAACTTTCGGCGCAGCCCTTGGCTACAACAACTTGTCTGAGTTGCCACCATTGAACTCTTGGAATATTGACGTCTTGATAGATACAATCAATCAGCTTGCACCTCAGACCAATTGGATACGGGTTATTGAAAAACTTGATCATGAAGGGTTTTTGCTTCCTAGTGAAGAAGCATTCTCTTTTCTCATGTCTGTATATAATCATGCCTGCAAGGAGCCGTTTCCTCTCCGTGCCATCTGTGGGTCTGTATGGGAGAACACTGAGGGTCAATTATCTTTCCTCAAATATGCTGTATCTGCACCACCAGAAGTGTTCACCTTTGCCCACTCTGCAAGACAACTGGCATATATCGATGCAGTTAATGGTTCTAAGCTTCAAACTGGACATTCTAACCATGCATGGACATGTCTTGACCTTTTGGACGTCCTTTGCCAGCTAGCTGAGAGGGGTCATGCCAATTCTGTTCGACCGATTTTTGAGTATCCCCTGAAACAGTGCCCCGAAGTCTTGCTTCTTGGGATGGCACATATCAATACTGCTTATAGCCTCTTCCAGCATGAAATATGTCTGACTGTTTTTCCCATGATATTAAAAAGTACCGATGGCAGTGGGATGATTCTACACCTTTGGCATGTTAATCCCAATCTGGTTTTGCGAGGGGTTATGGATTCTCAAAACGATGACTTAGACAACGTTACAAGAATTGTGGACATCTGCCAGGAACTAAAGATTCTATCATCTGTGGTGGAAATTATTCCCTCCTACTATGGTATTAGGTTAGCAGCTGTTGCTGGTAGAAAAGAATATCTTGACCTTGAGAAGTGGTTGGATAACAATTTAACTACATACAAAGATTTCTTCTTTGAGGAGTGCCTTAAGTTTTTAAAGGATGTACATCTTACTGGATCACAAGACCTATCTGGCAAATCTTTTCACCAGTCTGGAGCTTTTCTGAATCTGTATGCTGAGACTACTGCTACCTTCTTGAAGGTTCTTAAATCTCATACCAACTTGGTTACGTCCACACAACTTTCTGAGGAGCTGGAGAGGTTGCATATTTCTATCGTAGATTCTAATCCAAGGCTGCAAAATGGTGGGACTACTGATTCATCTGCTTGTGATGGATATGCGGATGACATCGAAGCCGAAGCAAACTCCTACTTCCATCAAATGTTTTCTGATTCGCTAAGCATGAATGAGATGGTGCATATGCTTTCCCGATTCAAGGAATCTTCAGTAAAGAGGGAGAAATCCATTTTCGAATGCATGATCGCTAATTTGTTTGAGGAGTATCGATTTTTTCAGAAGTATCCTGAAAGGCAACTCAAAATTGCTGCTGTTCTCTTTGGTTCTGTGATCAAGCATCAACTTGTAACTCATCTTTCGCTGGGGATTGCTCTTCGTTATGTTCTTGACGCGTTACGCAAGCCTGCAGATTCAAAAATGTTTATGTTTGGAAGTCTGGCATTGGAGCAGTTTGTGGATCGTCTTACTGAGTGGCCACAGTATTGCAATCACATTCTACAAATTTCCCATTTACGCAGTACACATTCAGAGATAGTTGGTTTCATTGAACAGGCTCTTGTCAGGATTTCAACTGGTCATGTAGATGTAGATGGGATGAGCCATGCTTCTGGTATTAGTAGCCATAATTCAGCACCAGCTACATTAGGGCATGTAGAGGTAAAACCCAATGCATCTAGCATCATACAAGCTGGACAGCAACATATGTCTCTGCAGCTTCAACAGAGACGTGACATTCCCCTGGATGATCGTTACAGAGCTTCTGTTGGATTTGGTTCATCTACCGATGTAAAATCACTCTTATCTTCTGCTGGGCAATCTTCGGTTGTTACACCTCTTGATGCTTCTAATACCAATAAGTTACACAGCACATTCAGTTCATCTTCAATGCTAGCTTCATCTGGTTTTGTCCGTCCTTCCCGTGGAGCTCCTTCTACAAGGTTTGGATCTGCCTTGAACATTGAAACTTTGGTTGCTGCCGCTGAGAAAAGAGAAACTCCCATTGAGGCTCCAGGATCAGAAGTTCAAGACAAGATATCATTTATAATTAATAATATTTCGATTGCTAATCTTGAAACTAAAGCAAAAGAGTTCACCGAAATTTTGAAGGAGCAGTACTATCCATGGTTTGCGCAGTATATGGTTATGAAAAGAGCGAGCATTGAGCCTAATTTCCATGACTTGTACCTGAAATTCCTGGATATAGTTAATTCAAAGGCTTTGAACAAAGAGATTGTCAAGGCAACATATGAAAATTGCAAGGTTCTTTTAGGATCGGAGCTTATAAAGTCAAGTTCTGAAGAGCGCTCTTTGCTTAAAAATCTGGGGAGCTGGCTAGGAAAGTTAACTATTGGACGGAATCAAGTACTGAGGGCTCGAGAAATAGACCCAAAATCTTTGATTATAGAGGCATATGAGAAGGGACTGATGATTGCTGTTATTCCATTTACTTCAAAGATCCTTGAACCATGCCATAACAGTCTTGCTTATCAACCCCCTAATCCTTGGACAATGGGCATTTTGGGATTGCTTGCTGAGATTTATTCAATGCCGAACTTGAAAATGAACCTCAAATTTGACATAGAGGTTTTATTCAAAAATTTAAGCGTAGATTTGAAGGATGTGACCCCAACTTCTCTTCTGAAGGATCGTAAGAGAGAAATTGAAGGAAATCCTGATTTCTCTAATAAAGATGTAGGAGCATCTCAAGCACAAATGATTTCTGATATAAAATCTGGCCTTGTACCTCCAGTAAATCAAGTGGACTTGCCGCTTGAGGTTAAGAATCCATCTAATACTGGGGGTCATCCACATATGTTATCTCAGTATGCTGGTCCTCTTCATATTTCTACGGGAACATTGATGGAAGAGGAGAAGGTAACACCTCTGGGCTTGTCTGATCAACTTCCCTCTGCCCAAGGACTATTACAAGCAACTCCTACCCCAGCACCCTTTTCCCTTAGCCAGATCCCAACTCAGATACCTAATATCGGGACTCATGTTATTATCAATCCAAAGCTCAGTAGTTTTGGGTTGCAAATGCATTTTCAGAGAGCCGTACCCATTGCAATGGATAGAGCTATCAAAGAGATTGTGTCTAGTATTGTTCAGCGTAGTGTTTCCATAGCAACACAGACAACAAAGGAGCTTGTTTTAAAGGATTATTCCATGGAATCAGACGAGACTCGAATATTAAATGCTGCACACTTGATGGTTGCTAGTCTGGCTGGGAGTTTAGCTCATGTTACATGCAAAGAACCTCTGCGAGCTTCAATATCAAGTCAGCTGAGGACTTCACTTCAGAATTTAAGTATTGGAAATGAAATTTTGGAACAAGCTGTGCAACTTGTCACCAATGATAATCTTGATCTTGGTTGTGCAGTCATTGAACAAGCTGCTACTGACAAGGCAATAAACACAATTGATACAGATATTGGTCAACAACTTTCTTTGAGAAGGAAGCATCGAGAAGGTATGGGTTCCACATTTTTTGATTCAAACTTGTATACACAAGGTTCCATGGGTGGTGTGCCAGATTACCTTCGCCCCAAACCCGGCCAGTTGTCCCTCTCACAACAACGTGTCTATGAGGACTTTGTTCGTCTACCCTGGCAAAATCAGTCTAGCCAGAGCTCAAATTCTTTGTCTGCTGTTCAATCTGGCAATGCTGATCTCTCTGGCAACAGTGGTTCTGTAAGCATGGGATATGAGGGGGTCTCTCGACAAGTAGATGATATGGCCGAATCTAATCTCGCTTCACAATTTAGTGCTTCCTCAATTCAAAATAGAGCTGCTGACAGTTCTTCCCAGCTTAGCTTGGAGAAAGATTCTGTTGCCTCATTCCCTTCAACTGCCTCCACCCCTGAGTTGCATGCAGTTGATTCATCTGATGCTGTGAAAGAATCTGGAGCTTCTTCCCAACCCCAGGTTTCATCAGGTGTTGTGGAGCGTTTTGGATCTAGCTTCTCGGAATCTTCTCTCACTACGAGGGATGCCTTGGATAAATACGAAATTGTTGTTCAAAAGTTGGAAGCTTTGGTTAACAATGATTCCACGGAAGCAGAAATACAAGAGGTCATTTCTGAGGTTCCTGAAATCTTACTCAGATGTGTCACTCGAGATGAGACCGCTATAGCTGTGGCTCAAAAGGTTTTCAAAGGTTTGTATGATAATGCATCAAACAGCATTCATGTCGGTGCTCATCTCGGGATCCTGACTGCCATTCGTGATGTTTGCAAGCTTGCTGTCAAAGAGCTTACTAGTTGGGTAACGTACTCGGAAGAAGAAAGGAAATTTAACAAGGATATTACTGTTGGCCTCATCCGCAGTGAATTGCTAAATCTTACAGAGTACAATGGTCATATGTCAAAGCTTATTGATGGGGGAAGGAACAAGGCTGCTACGGAGTTTTCCATCTCTCTTCTTCAGACCTTGGTTATTGAGGAACCTAAAGTTATTTCAGAACTTCACAATATCGTTGATGCTTTGGCAAAGCTTGCTACAAAGCCTGGATCCCCGGAATCAATACCACAACTGGTTGAGATGGTTAAGAATCCCACTGCTAGTGCTGCTGGTAATGCTGGAAAGGACGACAAGGCAAGACAATCAAGAGACAACAAGGGTCCTGGTATGCTTGTAGCAAACAGGGAAGAGTTAACCAGTGTAGAGTCTGTTGAACCAGATCCTGCTGGATTCCGTGAGCAGGTTTCCATGTCGTTCACAGAATGGTATAGGATATGTGAACTTCCTGGTGCCAATGATACAGCTTCTTCCCACTTCATCTTACAGTTGCATCAAAATGGTTTGCTTAAGGGGGATGATTTAACAGATCGCTTTTTACGGCTGTTGATGGAACTTGCTGTTGCACATTGCTTATCCACTGAGGTGATCAATTCAGGAGGATTGCAATCTCCTCAACAGCTGCAGCCAATGTCATTTCTTGCAATTGATGTCTATGCGAAGCTTGTCTTCTCAATCTTGAAGGGATCAAACAAAGTCTTTCTTCTTTCCAAGATTCTGTCAGTGACCATCAGATTCATTCTAAAGGATGTGGATGAGAAGAAGATGTCTTTTAATCCAAGACCATATTTCAGATTGTTCATTAACTGGCTTGTAGATCTTGGTTCACTTGAGCCGGTTACTGATGGTGCAAATCTCCAGATTTTGACTGCTTTTGCCAATGCATTTCATGCTTTGCAGCCCCTCAAAGTCCCTGGATTCAGTTTTGCATGGCTTGAGTTGATAAGTCACAGGAGCTTCATGCCAAAAATGTTGACTGGTAATGGTCAAAAAGGTTGGCCATATATCCAAAGGTTGCTTGTGGATCTGTTCCAATTTATGGAACCTTTTCTGAGACATGCTGAACTTGGAGACTCTGTTCGACTTCTCTATAAAGGCACACTTCGGGTGCTCTTGGTGCTACTTCATGACTTCCCAGAGTTCCTATGTGACTATCACTTTACCTTTTGTGATGTTATTCCTCCGAGCTGCATACAGATGCGAAATATCATTCTAAGTGCCTTTCCGCGTAGTATGCGTCTGCCAGATCCATCGACTCCCAATTTGAAGATTGATTTACTTCAAGAAATAACTCAATCACCTCGCATTCTTTCTGAGGTTGATGCTGCACTTAAAGCAAAGCAGATGAAGGCTGATGTAGATGAATACCTTAAGACAAGGCAGCAGAATTCTCCATTTTTGTCTGAACTGAAGGAGAAGCTACTGCTCTCACCAAGTGAAGCTGCCTCTGCTGGGACTCGTTACAATGTGCCTCTGATCAACTCTCTTGTGCTTTATGTTGGAATGCAGGCAATCCAGCAACTGCAGGGCCGAACTCCACATGCACAATCAGCAGCAAATGCTTTCCCATTGGCTGTATTTTCTGTCGGTGCTGCATTGGATATTTTCCAGACACTGATTATGGACTTGGACACGGAAGGGCGCTACCTTTTCCTAAATGCGGTTGCCAACCAACTCCGTTACCCAAATACACATACACACTACTTTTCCTTCATCCTTCTGTACTTGTTTGCAGAATCAAACCAGGAAATAATCCAAGAACAGATTACAAGAGTGTTGTTAGAGAGACTAATTGTGAATAGACCTCATCCATGGGGCCTCCTCATTACTTTCATTGAGCTTATCAAGAATCCTAGGTACAATTTCTGGAATAGGAGTTTCATAAGATGTGCTCCTGAGATTGAAAAACTGTTTGAATCAGTGTCGAGATCATGTGGTGGTCCTAAACCAGTTGATGAGAGTATGGTCTCTGGTTGGGTCTAA 7209 0.42 MTLVIESLSPITMGTFSNTASKQIRFLLNSLNQLNFDSVFHQLIQFTEFGTVGSILLLQTCLDHFNFARRDMKDIQPERILVDVVKYLLDKPNFNAVFSESVKNVEINESFLESFCNGLELSLMEKIAISLSLSDSENPDAKLCGKSFCIAQIEKLCANPGSLNCYELIHDIIMFLKQSEGLSKYVDSFMQILSLVQFKDTPSFVLNPLLPDEMREAEFLRNMELFHASGDNDFDAILADIEKEMNMGEIVNELGYGCTVDVSQCKEIFSLFTPLTESNLSKLLGSIARTHAGLEDNQSTFLTFGAALGYNNLSELPPLNSWNIDVLIDTINQLAPQTNWIRVIEKLDHEGFLLPSEEAFSFLMSVYNHACKEPFPLRAICGSVWENTEGQLSFLKYAVSAPPEVFTFAHSARQLAYIDAVNGSKLQTGHSNHAWTCLDLLDVLCQLAERGHANSVRPIFEYPLKQCPEVLLLGMAHINTAYSLFQHEICLTVFPMILKSTDGSGMILHLWHVNPNLVLRGVMDSQNDDLDNVTRIVDICQELKILSSVVEIIPSYYGIRLAAVAGRKEYLDLEKWLDNNLTTYKDFFFEECLKFLKDVHLTGSQDLSGKSFHQSGAFLNLYAETTATFLKVLKSHTNLVTSTQLSEELERLHISIVDSNPRLQNGGTTDSSACDGYADDIEAEANSYFHQMFSDSLSMNEMVHMLSRFKESSVKREKSIFECMIANLFEEYRFFQKYPERQLKIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPADSKMFMFGSLALEQFVDRLTEWPQYCNHILQISHLRSTHSEIVGFIEQALVRISTGHVDVDGMSHASGISSHNSAPATLGHVEVKPNASSIIQAGQQHMSLQLQQRRDIPLDDRYRASVGFGSSTDVKSLLSSAGQSSVVTPLDASNTNKLHSTFSSSSMLASSGFVRPSRGAPSTRFGSALNIETLVAAAEKRETPIEAPGSEVQDKISFIINNISIANLETKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDIVNSKALNKEIVKATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCHNSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLSVDLKDVTPTSLLKDRKREIEGNPDFSNKDVGASQAQMISDIKSGLVPPVNQVDLPLEVKNPSNTGGHPHMLSQYAGPLHISTGTLMEEEKVTPLGLSDQLPSAQGLLQATPTPAPFSLSQIPTQIPNIGTHVIINPKLSSFGLQMHFQRAVPIAMDRAIKEIVSSIVQRSVSIATQTTKELVLKDYSMESDETRILNAAHLMVASLAGSLAHVTCKEPLRASISSQLRTSLQNLSIGNEILEQAVQLVTNDNLDLGCAVIEQAATDKAINTIDTDIGQQLSLRRKHREGMGSTFFDSNLYTQGSMGGVPDYLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSNSLSAVQSGNADLSGNSGSVSMGYEGVSRQVDDMAESNLASQFSASSIQNRAADSSSQLSLEKDSVASFPSTASTPELHAVDSSDAVKESGASSQPQVSSGVVERFGSSFSESSLTTRDALDKYEIVVQKLEALVNNDSTEAEIQEVISEVPEILLRCVTRDETAIAVAQKVFKGLYDNASNSIHVGAHLGILTAIRDVCKLAVKELTSWVTYSEEERKFNKDITVGLIRSELLNLTEYNGHMSKLIDGGRNKAATEFSISLLQTLVIEEPKVISELHNIVDALAKLATKPGSPESIPQLVEMVKNPTASAAGNAGKDDKARQSRDNKGPGMLVANREELTSVESVEPDPAGFREQVSMSFTEWYRICELPGANDTASSHFILQLHQNGLLKGDDLTDRFLRLLMELAVAHCLSTEVINSGGLQSPQQLQPMSFLAIDVYAKLVFSILKGSNKVFLLSKILSVTIRFILKDVDEKKMSFNPRPYFRLFINWLVDLGSLEPVTDGANLQILTAFANAFHALQPLKVPGFSFAWLELISHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRHAELGDSVRLLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILSEVDAALKAKQMKADVDEYLKTRQQNSPFLSELKEKLLLSPSEAASAGTRYNVPLINSLVLYVGMQAIQQLQGRTPHAQSAANAFPLAVFSVGAALDIFQTLIMDLDTEGRYLFLNAVANQLRYPNTHTHYFSFILLYLFAESNQEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDESMVSGWV* 2403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0133 2402 MobiDBLite consensus disorder prediction 1588 1621 - -
Lan12g0133 2402 Pfam CCR4-NOT transcription complex subunit 1 CAF1-binding domain 977 1197 IPR032191 -
Lan12g0133 2402 MobiDBLite consensus disorder prediction 1519 1539 - -
Lan12g0133 2402 Pfam CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 1323 1465 IPR024557 -
Lan12g0133 2402 Pfam CCR4-NOT transcription complex subunit 1 TTP binding domain 662 829 IPR032193 -
Lan12g0133 2402 Gene3D - 1863 2156 - -
Lan12g0133 2402 Gene3D - 951 1199 - -
Lan12g0133 2402 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX 22 2401 IPR040398 GO:0017148|GO:0030015
Lan12g0133 2402 Gene3D - 2157 2388 - -
Lan12g0133 2402 MobiDBLite consensus disorder prediction 1830 1860 - -
Lan12g0133 2402 Gene3D - 667 833 IPR038535 -
Lan12g0133 2402 PANTHER BNACNNG58980D PROTEIN 22 2401 - -
Lan12g0133 2402 Pfam CCR4-NOT transcription complex subunit 1 HEAT repeat 488 634 IPR032194 -
Lan12g0133 2402 Pfam CCR4-Not complex component, Not1 2013 2383 IPR007196 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0133 Lan-Chr12 1541987 1566192 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0133 K12604 - gmx:100783935 4020.31