Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0108 ATGGAGTTGTGGGGTATTTTCTTTGTATCATTAATGCCAATTCTAAAGGTACTATTGATCACTGCTCTTGGGACATTACTTGCACTTGATCGATTTGAAATACTTGGAGAAAATGCTGCCAAACACTTGAATAATTTGGTATATTTTGTCTTTGCTCCTGCTCTTGTTTGTGGAAATCTAGCTAAAACCATAACTTTAAGGAGCATGATTATGTTGTGGTTCATGCCATTGAATGTTGTTCTCACATTTGTGATTGGAACATTTCTTGGATGGTTACTTATTAAAATAACTAAAGTTCCTCCTCGTCTTCAAGGCCTTGTATTGGGGTGCTGTTCAGCAGGAAATGTTGGAAACATGCCTCTTATTATAGTTCCAGCTCTCTGTAAAGAAAGAAGCAATCCTTTTGGAGATGTCAATATTTGCTATAGAAATGCATTAGCTTATACTTCTCTATCAATGGCATTAGGAACCATTTTGGTATGGTCTTATACTTACTACATTGTTAGCATTTATTCGCGCAAGCTTTTGGGTATTGTGGAAGTCGATTCGACAGAAAATCGAGTGTATGTGGCAGAAACAGATCCAGAAAACCTTTCAAAATGTTCCACAGAAGCATTTCATACAGCAGAAGATAGATCAAAGAGTAATGATGATGTGAAGGAACTTGAAATTGAATGCACACATGCAAAGGTATCAAAAAGGGGAAAGATTATGAAGCAGATGAAAATAATAGCTGAAAAGATCAACCTCAAAGTAATATTTTCACCTTGCACAATAGGAGTGATCGTTGGTTTAATCATTGGTGTAGTCCCTCAATTCAGAAAACTATTAGCCGTTGACGGCGCTCCTCTCCTAGTGGTTCAAGACTCTATAGACATGCTCGGGGATGCAGGAATTCCAGCAATGACCTTGTTAGTTGGGGCAAATCTTATTAAGGGTTTAAAAGGAAGCAGAAAACAACTTCCACTTATTATTGGCATTACTGTGGTTAGATTTATTGCATTACCAGCAATAGGTATAGGCATTGTTAAAGGTGCTATTCATTTTGGTATCATCCACTCTGATCCATTATATCAGTTTCTTTTACTGCTTCAATTTGCTCTTCCACCTGCAGTAGCCATGAGTACAATTACTCAATTATTTGGAGCTGGTGAGGGTGAATGCTCAGTGATCATGTTAGCAACTTATTCATGTGCTGCTGTTTCACTTACTCTATGGTGCACATTCTTTATGTGGCTTGTGCTATAA 1248 0.375 MELWGIFFVSLMPILKVLLITALGTLLALDRFEILGENAAKHLNNLVYFVFAPALVCGNLAKTITLRSMIMLWFMPLNVVLTFVIGTFLGWLLIKITKVPPRLQGLVLGCCSAGNVGNMPLIIVPALCKERSNPFGDVNICYRNALAYTSLSMALGTILVWSYTYYIVSIYSRKLLGIVEVDSTENRVYVAETDPENLSKCSTEAFHTAEDRSKSNDDVKELEIECTHAKVSKRGKIMKQMKIIAEKINLKVIFSPCTIGVIVGLIIGVVPQFRKLLAVDGAPLLVVQDSIDMLGDAGIPAMTLLVGANLIKGLKGSRKQLPLIIGITVVRFIALPAIGIGIVKGAIHFGIIHSDPLYQFLLLLQFALPPAVAMSTITQLFGAGEGECSVIMLATYSCAAVSLTLWCTFFMWLVL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0108 415 Pfam Membrane transport protein 10 406 IPR004776 GO:0016021|GO:0055085
Lan12g0108 415 PANTHER - 1 414 IPR045033 GO:0080162
Lan12g0108 415 PANTHER EFFLUX CARRIER FAMILY PROTEIN, PUTATIVE-RELATED 1 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0108 Lan-Chr12 1270165 1274337 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0108 K24139 - gmx:100807965 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0108 12 1270165 1274337 Lan1g2077 1 36009375 36016379 LSH