Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0077 ATGGCGATATTCTGGAAGCACGTGACTCTCTCTTCATCTCTTCTCCGGCGCTTCAAGCGTCACGTGACCGTCGCTAATTCCGGCCACCACCGTCACTTTCTGCCGTCCAGATCTGTCACCACTTCCGAAGGCCACCGTCCTTCCATCGTCCATAAACGCAGCCTTGATATTCTTCATGATCCTTGGTTCAACAAAGGAACAGCGTTTTCCATGACGGAAAGAGACCGGCTTGATCTACGTGGACTACTTCCTCCAAATGTTATGTCTACCCACCTACAGATTGAACGCTTCATGGTTGATCTGAAGAGGCTTGAAGTTCAAGCAAGAGACGGACCTTCTGATCCTAATGCACTGGCCAAGTGGCGGATTCTTAACCGCTTGCATGACAGAAATGAAGTCATGTACTATAAGGTTTTGATTGCTAATATTGAGGAATACGCACCAGTAGTGTATACTCCAACAGTTGGTCTTGTATGCCAGAACTATAGTGGACTGTTTAGGAGGCCAAGAGGAATGTACTTCAGTGCTCAGGATCGTGGAGAAATGATGTCTATGGTCTATAATTGGCCATCTGAGCAGGTTGATATGATTGTTGTTACTGATGGTAGCAGAATTCTCGGTCTTGGAGATCTTGGAGTTCAAGGAATTGGTATCGCAATTGGAAAGCTTGATCTATATGTTGCTGCTGCTGGGATAAATCCTCAAAGGGTACTTCCTGTCATGATTGATGTTGGGACTAACAATGAGAAGTTAATCAACGATCCGTTATATTTAGGATTGCAGCAGCACCGTCTTGATGGAGATGACTACCTTGCTGTTGTAGATGAATTCATGGAAGCTGTCTTTACTCGCTGGCCAAATGTGATTGTGCAGTTTGAAGATTTCCAAAGCAAGTGGGCATTCAAGTTATTACAGCGGTACAGAAATGCCTACAGAATGTTCAACGATGATGTGCAGGGAACAGCCGGTGTTGCTATTGCTGGACTTCTAGGTGCTGTAAGAGCGCAAGGAAGGCCAATGATTGACTTTCCAAAACAGAAGATTGTTGTTGCTGGTGCTGGAAGTGCAGGAATTGGGGTTCTTAATGCTGCTAGGAAAACAATGGCAAGGATGTTAGGTAATAATGAAGCAGCTTTTAACAGTGCCAAGAGTCAATTTTGGGTTGTTGATGCACAGGGATTAATCACAGAAGGACGTGAAAATATTGATCCGGATGCCCTTCCTTTTGCAAGAAATTTGAAAGAAATGGATCGTCAAGGACTGAGGGAAGGGGCAAGCCTTGTGGATGTGGTGAAGCAAGTGAGGCCTGATGTCCTTCTAGGATTATCTGCTGTTGGAGGTTTATTCTCAAAAGAGGTATTAGAGGCCCTCAAGGGTTCAACATCAACCAGACCAGCCATATTTGCCATGTCAAATCCAACAAAGAATGCTGAATGTACCCCTGAAGAAGCATTCTCCATTTTGGGTGACAACATTATATTTGCAAGTGGAAGTCCATTCAGTGATGTGGATCTCGGGAATGGTCATATTGGCCACTGCAACCAGGGAAATAATATGTATCTCTTTCCAGGCATTGGTCTTGGAACTCTTTTGTCCGGCGCTAGGATCGTCTCCGATGGCATGCTACAGGCTGCTGCTGAGTGTCTGGCTGCATATATGAGTGATGAGGAGGTCCTCCAAGGGACTATCTTCCCTTCAATTTCCAGAATTCGAGATATTACGAAAGAGGTAGCTGCTGCTGTTATAAAGGAAGCTCTGGAGGAGGATCTAGCTGAAGGATATCATGGAATGGATCCTCGAGAGCTGCGCAAACTTAGTCAGGATGAAATTGCAGAATATGTGAAGAATCACATGTGGAATCCAGAGTACCCAACACTAGTTTACAAGCAAGATTAA 1896 0.4488 MAIFWKHVTLSSSLLRRFKRHVTVANSGHHRHFLPSRSVTTSEGHRPSIVHKRSLDILHDPWFNKGTAFSMTERDRLDLRGLLPPNVMSTHLQIERFMVDLKRLEVQARDGPSDPNALAKWRILNRLHDRNEVMYYKVLIANIEEYAPVVYTPTVGLVCQNYSGLFRRPRGMYFSAQDRGEMMSMVYNWPSEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEKLINDPLYLGLQQHRLDGDDYLAVVDEFMEAVFTRWPNVIVQFEDFQSKWAFKLLQRYRNAYRMFNDDVQGTAGVAIAGLLGAVRAQGRPMIDFPKQKIVVAGAGSAGIGVLNAARKTMARMLGNNEAAFNSAKSQFWVVDAQGLITEGRENIDPDALPFARNLKEMDRQGLREGASLVDVVKQVRPDVLLGLSAVGGLFSKEVLEALKGSTSTRPAIFAMSNPTKNAECTPEEAFSILGDNIIFASGSPFSDVDLGNGHIGHCNQGNNMYLFPGIGLGTLLSGARIVSDGMLQAAAECLAAYMSDEEVLQGTIFPSISRIRDITKEVAAAVIKEALEEDLAEGYHGMDPRELRKLSQDEIAEYVKNHMWNPEYPTLVYKQD* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0077 631 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 318 628 IPR036291 -
Lan12g0077 631 SMART Malic_M_2 318 586 IPR012302 GO:0051287
Lan12g0077 631 PANTHER MALIC ENZYME 32 627 - -
Lan12g0077 631 PANTHER MALIC ENZYME-RELATED 32 627 - -
Lan12g0077 631 SMART malic_2 128 308 IPR012301 GO:0004471
Lan12g0077 631 CDD NAD_bind_1_malic_enz 318 621 - -
Lan12g0077 631 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 28 317 IPR046346 -
Lan12g0077 631 Gene3D - 52 315 IPR037062 GO:0004471
Lan12g0077 631 Pfam Malic enzyme, NAD binding domain 318 585 IPR012302 GO:0051287
Lan12g0077 631 ProSitePatterns Malic enzymes signature. 314 330 IPR015884 GO:0004471
Lan12g0077 631 Gene3D - 316 631 - -
Lan12g0077 631 PRINTS Malic enzyme signature 134 158 IPR001891 GO:0004470|GO:0004471
Lan12g0077 631 PRINTS Malic enzyme signature 194 223 IPR001891 GO:0004470|GO:0004471
Lan12g0077 631 PRINTS Malic enzyme signature 230 252 IPR001891 GO:0004470|GO:0004471
Lan12g0077 631 PRINTS Malic enzyme signature 289 307 IPR001891 GO:0004470|GO:0004471
Lan12g0077 631 PRINTS Malic enzyme signature 314 330 IPR001891 GO:0004470|GO:0004471
Lan12g0077 631 PRINTS Malic enzyme signature 348 364 IPR001891 GO:0004470|GO:0004471
Lan12g0077 631 PRINTS Malic enzyme signature 462 478 IPR001891 GO:0004470|GO:0004471
Lan12g0077 631 Pfam Malic enzyme, N-terminal domain 128 308 IPR012301 GO:0004471
Lan12g0077 631 PIRSF ME 18 629 IPR001891 GO:0004470|GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0077 Lan-Chr12 749459 769040 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0077 K00028 - gmx:100799344 1120.53