Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0061 ATGTCACAACAGCAAAACAGTAACATCCCAGTGAGCGAGGTTTTCTGGACTCTCGCTGATAAAGCTGACAAGAAATTCTCTAACATCAGGGATTTGCCTTATTACCAACGCACTAGGCATGATACATACTTTTATAAGGTGTTCAAGGTGTACACACAATTGTGGAAGTTTCAACAGGAGAATCGGCAGAAATTGGTCGAGGCTGGGCTTAAGAGATGGGAGATTGGTGAGATTGCATCTCGCATTGGGCAACTGTATTTCGGGCAGTACATGCGCACCAGTGAGGCGAATTACCTATCTGAATCATATATTTTTTATGAAGCGATATTGACACGGGAGTATTTTAAGGAGGGGTTGTTTCAGGATGTCAATATTGCAAACAAACAATTGAGGTTTCTTGCTCGGTTCCTAATGGTGTGTTTGGTTTTGAACCGGAGAGAAATGGTGCAGCAATTGGTTAATCAGCTTCAAGTATTAGTCAGTGAATGCAAAAGGACATTCCAGGAAAGTGACTTTAAAGAGTGGAAGGTGGTGGTTCAGGAAATAGTCAGGTTTTTAAAAGCAGACACAGCTTTTATGAATATCAGGCCCTTGAGATACAGTCTAGTATTGGACCCTCATCCGGATACTTTACCAAATGTTTCTGCAGCTATTACAAAGCGAAATTTGAAATTACGAGATGCTGTACTAAGTAGCTTCCATCACAACGAGGTTAAGTTTTCAGAGCTCACAATTGACACTTTTAGGATGCTTCAATGTCTGGAGTGGGAACCTAGTGGCTTATTTTACCAATCAACTGGCTCAAAACTTAGTCATAATGGGGCAACCGGGGCTACTCGTATCAATTACTCTCAAGATATTGCTGATCCCACCCTACCGACAAACCCAAGGAAAGCTGTGTTATACCGTCCTTCATTGACACATTTTATAGCTGTTCTTGCCACAATTTGTGAGGAGCTTCCTTCTGATGGTATTCTCCTTGTATATTTGTCAGCTTCAGGATCTTGTGGTGCTGCACAAAATGAACCTGGTTGTATACTCTTCGGTCCCCGTGGAGATGGAGGATCGAACTGCATATATCCATCCGACTTTCTACCGTTTACAAGAAGGCCACTTCTTTTAGTTATCGATAATGACAACAGCAAAGCATTTAAGATCATCGAAGAATCACAAAAAGGAGAGTCGGTTGCTATGCTCCTTTCTCCAAGCTGTTCACCTCCTATTGCATCAAATTACTCACATCATTCAAATGGAAGCCTATTTACCATGTTTCTCACATCTCCTCTGCAAGCTTTCTGTCTGCTCATAGGACTTTCGGGCACTGATATTGATTTGGATACATACAACAAAGCTGAATTACTGCTCTCACAATCATTGAACAAGTGGGGAATGGCTTTAGCAACATCGGACACGCTTAATCCTGTTTGGGGACAGGTTTTAGGTGATCCTTTCATTAGGAGGCTTCTTTTAAGATTCATCTTTTGCAAGGAAGTGTTGGCCCTGTATGCACCAGTTTACAATAAAACAGAATTCCTTCCAACATGTGTCCCTTCTCTTTCAATCCCTGTCCTGTCCTCAAGTGATTCATTTCAGAGTGTAATTCTGCAACTTTGCAGCATTTTTGGTGCAACTAAGTGTTTCATCTTCTCAGAGGATGTTCTTCCTGAAAATCTACTTACAGATGTGGATAAGTTGTGCACTCTATGA 1707 0.4148 MSQQQNSNIPVSEVFWTLADKADKKFSNIRDLPYYQRTRHDTYFYKVFKVYTQLWKFQQENRQKLVEAGLKRWEIGEIASRIGQLYFGQYMRTSEANYLSESYIFYEAILTREYFKEGLFQDVNIANKQLRFLARFLMVCLVLNRREMVQQLVNQLQVLVSECKRTFQESDFKEWKVVVQEIVRFLKADTAFMNIRPLRYSLVLDPHPDTLPNVSAAITKRNLKLRDAVLSSFHHNEVKFSELTIDTFRMLQCLEWEPSGLFYQSTGSKLSHNGATGATRINYSQDIADPTLPTNPRKAVLYRPSLTHFIAVLATICEELPSDGILLVYLSASGSCGAAQNEPGCILFGPRGDGGSNCIYPSDFLPFTRRPLLLVIDNDNSKAFKIIEESQKGESVAMLLSPSCSPPIASNYSHHSNGSLFTMFLTSPLQAFCLLIGLSGTDIDLDTYNKAELLLSQSLNKWGMALATSDTLNPVWGQVLGDPFIRRLLLRFIFCKEVLALYAPVYNKTEFLPTCVPSLSIPVLSSSDSFQSVILQLCSIFGATKCFIFSEDVLPENLLTDVDKLCTL* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0061 568 Pfam Protein SCAI 18 341 IPR022709 GO:0003714|GO:0006351
Lan12g0061 568 Pfam Protein SCAI 344 503 IPR022709 GO:0003714|GO:0006351
Lan12g0061 568 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 3 339 - -
Lan12g0061 568 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 340 557 - -
Lan12g0061 568 PANTHER PROTEIN SCAI 3 339 - -
Lan12g0061 568 PANTHER PROTEIN SCAI 340 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0061 Lan-Chr12 551779 559912 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0061 - - gmx:100810202 969.533